Read the Docs build information
Build id: 883226
Project: institute-for-disease-modeling-synthpops-test
Version: latest
Commit: 76e8c669a7d8b09cd457bc0daba50d45dbef88e4
Date: 2022-03-14T22:37:41.510503Z
State: finished
Success: False


[rtd-command-info] start-time: 2022-03-14T22:37:43.484807Z, end-time: 2022-03-14T22:37:51.147990Z, duration: 7, exit-code: 0
git clone --no-single-branch --depth 50 git@github.com:InstituteforDiseaseModeling/synthpops.git .
Cloning into '.'...
Warning: Permanently added 'github.com,192.30.255.113' (ECDSA) to the list of known hosts.

[rtd-command-info] start-time: 2022-03-14T22:37:51.394883Z, end-time: 2022-03-14T22:37:51.546832Z, duration: 0, exit-code: 0
git checkout --force origin/master
Note: switching to 'origin/master'.

You are in 'detached HEAD' state. You can look around, make experimental
changes and commit them, and you can discard any commits you make in this
state without impacting any branches by switching back to a branch.

If you want to create a new branch to retain commits you create, you may
do so (now or later) by using -c with the switch command. Example:

  git switch -c <new-branch-name>

Or undo this operation with:

  git switch -

Turn off this advice by setting config variable advice.detachedHead to false

HEAD is now at 76e8c66 Merge pull request #542 from amath-idm/license-update

[rtd-command-info] start-time: 2022-03-14T22:37:51.724925Z, end-time: 2022-03-14T22:37:51.789431Z, duration: 0, exit-code: 0
git clean -d -f -f


[rtd-command-info] start-time: 2022-03-14T22:37:52.987015Z, end-time: 2022-03-14T22:37:58.703890Z, duration: 5, exit-code: 0
python3.7 -mvirtualenv --system-site-packages 
Using base prefix '/home/docs/.pyenv/versions/3.7.9'
New python executable in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/bin/python3.7
Also creating executable in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/bin/python
Installing setuptools, pip, wheel...
done.

[rtd-command-info] start-time: 2022-03-14T22:37:58.873206Z, end-time: 2022-03-14T22:38:00.742276Z, duration: 1, exit-code: 0
python -m pip install --upgrade --no-cache-dir pip setuptools<58.3.0
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[rtd-command-info] start-time: 2022-03-14T22:38:00.910245Z, end-time: 2022-03-14T22:38:09.548449Z, duration: 8, exit-code: 0
python -m pip install --upgrade --no-cache-dir -I mock==1.0.1 pillow==5.4.1 alabaster>=0.7,<0.8,!=0.7.5 commonmark==0.8.1 recommonmark==0.5.0 sphinx<2 sphinx-rtd-theme<0.5 readthedocs-sphinx-ext<2.2 setuptools<58.3.0
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Building wheels for collected packages: mock, future
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Installing collected packages: snowballstemmer, pytz, mock, certifi, alabaster, urllib3, sphinxcontrib-serializinghtml, six, setuptools, pyparsing, Pygments, pillow, MarkupSafe, imagesize, idna, future, docutils, charset-normalizer, babel, sphinxcontrib-websupport, requests, packaging, Jinja2, commonmark, sphinx, readthedocs-sphinx-ext, sphinx-rtd-theme, recommonmark
ERROR: pip's dependency resolver does not currently take into account all the packages that are installed. This behaviour is the source of the following dependency conflicts.
matplotlib 3.3.2 requires pillow>=6.2.0, but you have pillow 5.4.1 which is incompatible.
Successfully installed Jinja2-3.0.3 MarkupSafe-2.1.0 Pygments-2.11.2 alabaster-0.7.12 babel-2.9.1 certifi-2021.10.8 charset-normalizer-2.0.12 commonmark-0.8.1 docutils-0.17.1 future-0.18.2 idna-3.3 imagesize-1.3.0 mock-1.0.1 packaging-21.3 pillow-5.4.1 pyparsing-3.0.7 pytz-2021.3 readthedocs-sphinx-ext-2.1.4 recommonmark-0.5.0 requests-2.27.1 setuptools-58.2.0 six-1.16.0 snowballstemmer-2.2.0 sphinx-1.8.6 sphinx-rtd-theme-0.4.3 sphinxcontrib-serializinghtml-1.1.5 sphinxcontrib-websupport-1.2.4 urllib3-1.26.8

[rtd-command-info] start-time: 2022-03-14T22:38:09.727502Z, end-time: 2022-03-14T22:38:16.399573Z, duration: 6, exit-code: 0
python -m pip install --exists-action=w --no-cache-dir -r docs/requirements.txt
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Successfully built pandoc
Installing collected packages: ply, llvmlite, iniconfig, zipp, typing-extensions, tomli, pypandoc, py, pockets, plumbum, numba, attrs, sphinxcontrib-napoleon, plantweb, pandoc, importlib-metadata, pluggy, pytest
Successfully installed attrs-21.4.0 importlib-metadata-4.11.3 iniconfig-1.1.1 llvmlite-0.31.0 numba-0.48.0 pandoc-2.1 plantweb-1.2.1 pluggy-1.0.0 plumbum-1.7.2 ply-3.11 pockets-0.9.1 py-1.11.0 pypandoc-1.7.2 pytest-7.1.0 sphinxcontrib-napoleon-0.7 tomli-2.0.1 typing-extensions-4.1.1 zipp-3.7.0

[rtd-command-info] start-time: 2022-03-14T22:38:16.584688Z, end-time: 2022-03-14T22:38:42.102941Z, duration: 25, exit-code: 1
python ./setup.py install --force
running install
running bdist_egg
running egg_info
creating synthpops.egg-info
writing synthpops.egg-info/PKG-INFO
writing dependency_links to synthpops.egg-info/dependency_links.txt
writing requirements to synthpops.egg-info/requires.txt
writing top-level names to synthpops.egg-info/top_level.txt
writing manifest file 'synthpops.egg-info/SOURCES.txt'
reading manifest file 'synthpops.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
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warning: manifest_maker: MANIFEST.in, line 4: unknown action 'global-prune'

warning: manifest_maker: MANIFEST.in, line 5: unknown action 'global-prune'

adding license file 'LICENSE'
writing manifest file 'synthpops.egg-info/SOURCES.txt'
installing library code to build/bdist.linux-x86_64/egg
running install_lib
running build_py
creating build
creating build/lib
creating build/lib/synthpops
copying synthpops/base.py -> build/lib/synthpops
copying synthpops/data_distributions.py -> build/lib/synthpops
copying synthpops/data.py -> build/lib/synthpops
copying synthpops/pop.py -> build/lib/synthpops
copying synthpops/config.py -> build/lib/synthpops
copying synthpops/workplaces.py -> build/lib/synthpops
copying synthpops/contact_networks.py -> build/lib/synthpops
copying synthpops/households.py -> build/lib/synthpops
copying synthpops/plotting.py -> build/lib/synthpops
copying synthpops/defaults.py -> build/lib/synthpops
copying synthpops/schools.py -> build/lib/synthpops
copying synthpops/__init__.py -> build/lib/synthpops
copying synthpops/sampling.py -> build/lib/synthpops
copying synthpops/version.py -> build/lib/synthpops
copying synthpops/ltcfs.py -> build/lib/synthpops
creating build/lib/synthpops/people
copying synthpops/people/state_age_data.py -> build/lib/synthpops/people
copying synthpops/people/household_size_data.py -> build/lib/synthpops/people
copying synthpops/people/loaders.py -> build/lib/synthpops/people
copying synthpops/people/utils.py -> build/lib/synthpops/people
copying synthpops/people/country_age_data.py -> build/lib/synthpops/people
copying synthpops/people/people.py -> build/lib/synthpops/people
copying synthpops/people/__init__.py -> build/lib/synthpops/people
copying synthpops/people/makepop.py -> build/lib/synthpops/people
creating build/lib/synthpops/data
copying synthpops/data/MUestimates_all_locations.obj -> build/lib/synthpops/data
copying synthpops/data/MUestimates_home.obj -> build/lib/synthpops/data
copying synthpops/data/MUestimates_other_locations.obj -> build/lib/synthpops/data
copying synthpops/data/MUestimates_school.obj -> build/lib/synthpops/data
copying synthpops/data/MUestimates_work.obj -> build/lib/synthpops/data
copying synthpops/data/Malawi.json -> build/lib/synthpops/data
copying synthpops/data/Nepal.json -> build/lib/synthpops/data
copying synthpops/data/Senegal-Dakar-Dakar.json -> build/lib/synthpops/data
copying synthpops/data/Senegal-Dakar.json -> build/lib/synthpops/data
copying synthpops/data/Senegal.json -> build/lib/synthpops/data
copying synthpops/data/Zimbabwe.json -> build/lib/synthpops/data
copying synthpops/data/bangladesh-dhaka-dhaka_city.json -> build/lib/synthpops/data
copying synthpops/data/usa-Oregon-portland_metro.json -> build/lib/synthpops/data
copying synthpops/data/usa-Oregon.json -> build/lib/synthpops/data
copying synthpops/data/usa-Washington-Franklin_County.json -> build/lib/synthpops/data
copying synthpops/data/usa-Washington-Island_County.json -> build/lib/synthpops/data
copying synthpops/data/usa-Washington-Spokane_County.json -> build/lib/synthpops/data
copying synthpops/data/usa-Washington-seattle_metro.json -> build/lib/synthpops/data
copying synthpops/data/usa-Washington.json -> build/lib/synthpops/data
copying synthpops/data/usa.json -> build/lib/synthpops/data
creating build/bdist.linux-x86_64
creating build/bdist.linux-x86_64/egg
creating build/bdist.linux-x86_64/egg/synthpops
creating build/bdist.linux-x86_64/egg/synthpops/data
copying build/lib/synthpops/data/usa-Washington-seattle_metro.json -> build/bdist.linux-x86_64/egg/synthpops/data
copying build/lib/synthpops/data/Malawi.json -> build/bdist.linux-x86_64/egg/synthpops/data
copying build/lib/synthpops/data/Senegal-Dakar-Dakar.json -> build/bdist.linux-x86_64/egg/synthpops/data
copying build/lib/synthpops/data/usa-Oregon-portland_metro.json -> build/bdist.linux-x86_64/egg/synthpops/data
copying build/lib/synthpops/data/usa-Washington-Island_County.json -> build/bdist.linux-x86_64/egg/synthpops/data
copying build/lib/synthpops/data/MUestimates_work.obj -> build/bdist.linux-x86_64/egg/synthpops/data
copying build/lib/synthpops/data/usa-Washington.json -> build/bdist.linux-x86_64/egg/synthpops/data
copying build/lib/synthpops/data/MUestimates_home.obj -> build/bdist.linux-x86_64/egg/synthpops/data
copying build/lib/synthpops/data/MUestimates_other_locations.obj -> build/bdist.linux-x86_64/egg/synthpops/data
copying build/lib/synthpops/data/Senegal.json -> build/bdist.linux-x86_64/egg/synthpops/data
copying build/lib/synthpops/data/MUestimates_all_locations.obj -> build/bdist.linux-x86_64/egg/synthpops/data
copying build/lib/synthpops/data/usa-Washington-Franklin_County.json -> build/bdist.linux-x86_64/egg/synthpops/data
copying build/lib/synthpops/data/usa-Oregon.json -> build/bdist.linux-x86_64/egg/synthpops/data
copying build/lib/synthpops/data/MUestimates_school.obj -> build/bdist.linux-x86_64/egg/synthpops/data
copying build/lib/synthpops/data/Senegal-Dakar.json -> build/bdist.linux-x86_64/egg/synthpops/data
copying build/lib/synthpops/data/usa.json -> build/bdist.linux-x86_64/egg/synthpops/data
copying build/lib/synthpops/data/Zimbabwe.json -> build/bdist.linux-x86_64/egg/synthpops/data
copying build/lib/synthpops/data/usa-Washington-Spokane_County.json -> build/bdist.linux-x86_64/egg/synthpops/data
copying build/lib/synthpops/data/bangladesh-dhaka-dhaka_city.json -> build/bdist.linux-x86_64/egg/synthpops/data
copying build/lib/synthpops/data/Nepal.json -> build/bdist.linux-x86_64/egg/synthpops/data
copying build/lib/synthpops/base.py -> build/bdist.linux-x86_64/egg/synthpops
copying build/lib/synthpops/data_distributions.py -> build/bdist.linux-x86_64/egg/synthpops
copying build/lib/synthpops/data.py -> build/bdist.linux-x86_64/egg/synthpops
creating build/bdist.linux-x86_64/egg/synthpops/people
copying build/lib/synthpops/people/state_age_data.py -> build/bdist.linux-x86_64/egg/synthpops/people
copying build/lib/synthpops/people/household_size_data.py -> build/bdist.linux-x86_64/egg/synthpops/people
copying build/lib/synthpops/people/loaders.py -> build/bdist.linux-x86_64/egg/synthpops/people
copying build/lib/synthpops/people/utils.py -> build/bdist.linux-x86_64/egg/synthpops/people
copying build/lib/synthpops/people/country_age_data.py -> build/bdist.linux-x86_64/egg/synthpops/people
copying build/lib/synthpops/people/people.py -> build/bdist.linux-x86_64/egg/synthpops/people
copying build/lib/synthpops/people/__init__.py -> build/bdist.linux-x86_64/egg/synthpops/people
copying build/lib/synthpops/people/makepop.py -> build/bdist.linux-x86_64/egg/synthpops/people
copying build/lib/synthpops/pop.py -> build/bdist.linux-x86_64/egg/synthpops
copying build/lib/synthpops/config.py -> build/bdist.linux-x86_64/egg/synthpops
copying build/lib/synthpops/workplaces.py -> build/bdist.linux-x86_64/egg/synthpops
copying build/lib/synthpops/contact_networks.py -> build/bdist.linux-x86_64/egg/synthpops
copying build/lib/synthpops/households.py -> build/bdist.linux-x86_64/egg/synthpops
copying build/lib/synthpops/plotting.py -> build/bdist.linux-x86_64/egg/synthpops
copying build/lib/synthpops/defaults.py -> build/bdist.linux-x86_64/egg/synthpops
copying build/lib/synthpops/schools.py -> build/bdist.linux-x86_64/egg/synthpops
copying build/lib/synthpops/__init__.py -> build/bdist.linux-x86_64/egg/synthpops
copying build/lib/synthpops/sampling.py -> build/bdist.linux-x86_64/egg/synthpops
copying build/lib/synthpops/version.py -> build/bdist.linux-x86_64/egg/synthpops
copying build/lib/synthpops/ltcfs.py -> build/bdist.linux-x86_64/egg/synthpops
byte-compiling build/bdist.linux-x86_64/egg/synthpops/base.py to base.cpython-37.pyc
byte-compiling build/bdist.linux-x86_64/egg/synthpops/data_distributions.py to data_distributions.cpython-37.pyc
byte-compiling build/bdist.linux-x86_64/egg/synthpops/data.py to data.cpython-37.pyc
byte-compiling build/bdist.linux-x86_64/egg/synthpops/people/state_age_data.py to state_age_data.cpython-37.pyc
byte-compiling build/bdist.linux-x86_64/egg/synthpops/people/household_size_data.py to household_size_data.cpython-37.pyc
byte-compiling build/bdist.linux-x86_64/egg/synthpops/people/loaders.py to loaders.cpython-37.pyc
byte-compiling build/bdist.linux-x86_64/egg/synthpops/people/utils.py to utils.cpython-37.pyc
byte-compiling build/bdist.linux-x86_64/egg/synthpops/people/country_age_data.py to country_age_data.cpython-37.pyc
byte-compiling build/bdist.linux-x86_64/egg/synthpops/people/people.py to people.cpython-37.pyc
byte-compiling build/bdist.linux-x86_64/egg/synthpops/people/__init__.py to __init__.cpython-37.pyc
byte-compiling build/bdist.linux-x86_64/egg/synthpops/people/makepop.py to makepop.cpython-37.pyc
byte-compiling build/bdist.linux-x86_64/egg/synthpops/pop.py to pop.cpython-37.pyc
byte-compiling build/bdist.linux-x86_64/egg/synthpops/config.py to config.cpython-37.pyc
byte-compiling build/bdist.linux-x86_64/egg/synthpops/workplaces.py to workplaces.cpython-37.pyc
byte-compiling build/bdist.linux-x86_64/egg/synthpops/contact_networks.py to contact_networks.cpython-37.pyc
byte-compiling build/bdist.linux-x86_64/egg/synthpops/households.py to households.cpython-37.pyc
byte-compiling build/bdist.linux-x86_64/egg/synthpops/plotting.py to plotting.cpython-37.pyc
byte-compiling build/bdist.linux-x86_64/egg/synthpops/defaults.py to defaults.cpython-37.pyc
byte-compiling build/bdist.linux-x86_64/egg/synthpops/schools.py to schools.cpython-37.pyc
byte-compiling build/bdist.linux-x86_64/egg/synthpops/__init__.py to __init__.cpython-37.pyc
byte-compiling build/bdist.linux-x86_64/egg/synthpops/sampling.py to sampling.cpython-37.pyc
byte-compiling build/bdist.linux-x86_64/egg/synthpops/version.py to version.cpython-37.pyc
byte-compiling build/bdist.linux-x86_64/egg/synthpops/ltcfs.py to ltcfs.cpython-37.pyc
creating build/bdist.linux-x86_64/egg/EGG-INFO
copying synthpops.egg-info/PKG-INFO -> build/bdist.linux-x86_64/egg/EGG-INFO
copying synthpops.egg-info/SOURCES.txt -> build/bdist.linux-x86_64/egg/EGG-INFO
copying synthpops.egg-info/dependency_links.txt -> build/bdist.linux-x86_64/egg/EGG-INFO
copying synthpops.egg-info/requires.txt -> build/bdist.linux-x86_64/egg/EGG-INFO
copying synthpops.egg-info/top_level.txt -> build/bdist.linux-x86_64/egg/EGG-INFO
zip_safe flag not set; analyzing archive contents...
synthpops.__pycache__.config.cpython-37: module references __file__
synthpops.__pycache__.defaults.cpython-37: module references __file__
creating dist
creating 'dist/synthpops-1.10.5-py3.7.egg' and adding 'build/bdist.linux-x86_64/egg' to it
removing 'build/bdist.linux-x86_64/egg' (and everything under it)
Processing synthpops-1.10.5-py3.7.egg
creating /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/synthpops-1.10.5-py3.7.egg
Extracting synthpops-1.10.5-py3.7.egg to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages
Adding synthpops 1.10.5 to easy-install.pth file

Installed /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/synthpops-1.10.5-py3.7.egg
Processing dependencies for synthpops==1.10.5
Searching for jsbeautifier
Reading https://pypi.org/simple/jsbeautifier/
Downloading https://files.pythonhosted.org/packages/56/3a/4f3bdfa7e6c472d347a04f267faa55d2ff1a5ab993b63f0c2ead1cdfa512/jsbeautifier-1.14.0.tar.gz#sha256=84fdb008d8af89619269a6aca702288b48f837a99427a0f529aa57ecfb36ee3c
Best match: jsbeautifier 1.14.0
Processing jsbeautifier-1.14.0.tar.gz
Writing /tmp/easy_install-uj0tir4m/jsbeautifier-1.14.0/setup.cfg
Running jsbeautifier-1.14.0/setup.py -q bdist_egg --dist-dir /tmp/easy_install-uj0tir4m/jsbeautifier-1.14.0/egg-dist-tmp-hpujuo65
package init file 'jsbeautifier/tests/generated/__init__.py' not found (or not a regular file)
warning: no files found matching 'js-beautify'
zip_safe flag not set; analyzing archive contents...
jsbeautifier.unpackers.__pycache__.__init__.cpython-37: module references __path__
jsbeautifier.unpackers.tests.__pycache__.testmyobfuscate.cpython-37: module references __path__
creating /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/jsbeautifier-1.14.0-py3.7.egg
Extracting jsbeautifier-1.14.0-py3.7.egg to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages
Adding jsbeautifier 1.14.0 to easy-install.pth file
Installing js-beautify script to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/bin

Installed /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/jsbeautifier-1.14.0-py3.7.egg
Searching for jsonobject
Reading https://pypi.org/simple/jsonobject/
Downloading https://files.pythonhosted.org/packages/75/04/1af431c5597bf1ebf2d742f7ae83604a0065767a931fe348f0408c8b7bf1/jsonobject-1.0.0.tar.gz#sha256=29acba651a4e181d7f8cd8dc5c91f14b2d571e85dc0d185def0ed338f924ea0c
Best match: jsonobject 1.0.0
Processing jsonobject-1.0.0.tar.gz
Writing /tmp/easy_install-uycxp4ax/jsonobject-1.0.0/setup.cfg
Running jsonobject-1.0.0/setup.py -q bdist_egg --dist-dir /tmp/easy_install-uycxp4ax/jsonobject-1.0.0/egg-dist-tmp-tvjf__1t
Warning: 'classifiers' should be a list, got type 'tuple'
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jsonobject.__pycache__.api.cpython-37: module references __file__
jsonobject.__pycache__.base.cpython-37: module references __file__
jsonobject.__pycache__.base_properties.cpython-37: module references __file__
jsonobject.__pycache__.containers.cpython-37: module references __file__
jsonobject.__pycache__.properties.cpython-37: module references __file__
jsonobject.__pycache__.utils.cpython-37: module references __file__
You are running without Cython installed. It is highly recommended to run
  pip install cython>=0.29.21,<1.0.0
before you continue
creating /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/jsonobject-1.0.0-py3.7-linux-x86_64.egg
Extracting jsonobject-1.0.0-py3.7-linux-x86_64.egg to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages
Adding jsonobject 1.0.0 to easy-install.pth file

Installed /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/jsonobject-1.0.0-py3.7-linux-x86_64.egg
Searching for pydot
Reading https://pypi.org/simple/pydot/
Downloading https://files.pythonhosted.org/packages/ea/76/75b1bb82e9bad3e3d656556eaa353d8cd17c4254393b08ec9786ac8ed273/pydot-1.4.2-py2.py3-none-any.whl#sha256=66c98190c65b8d2e2382a441b4c0edfdb4f4c025ef9cb9874de478fb0793a451
Best match: pydot 1.4.2
Processing pydot-1.4.2-py2.py3-none-any.whl
Installing pydot-1.4.2-py2.py3-none-any.whl to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages
Adding pydot 1.4.2 to easy-install.pth file

Installed /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/pydot-1.4.2-py3.7.egg
Searching for graphviz
Reading https://pypi.org/simple/graphviz/
Downloading https://files.pythonhosted.org/packages/9d/fb/886e8ec7862989afc0c35d15813b6c665fe134cc6027cdde2fa300abe9a2/graphviz-0.19.1-py3-none-any.whl#sha256=f34088c08be2ec16279dfa9c3b4ff3d1453c5c67597a33e2819b000e18d4c546
Best match: graphviz 0.19.1
Processing graphviz-0.19.1-py3-none-any.whl
Installing graphviz-0.19.1-py3-none-any.whl to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages
Adding graphviz 0.19.1 to easy-install.pth file

Installed /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/graphviz-0.19.1-py3.7.egg
Searching for seaborn
Reading https://pypi.org/simple/seaborn/
Downloading https://files.pythonhosted.org/packages/10/5b/0479d7d845b5ba410ca702ffcd7f2cd95a14a4dfff1fde2637802b258b9b/seaborn-0.11.2-py3-none-any.whl#sha256=85a6baa9b55f81a0623abddc4a26b334653ff4c6b18c418361de19dbba0ef283
Best match: seaborn 0.11.2
Processing seaborn-0.11.2-py3-none-any.whl
Installing seaborn-0.11.2-py3-none-any.whl to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages
Adding seaborn 0.11.2 to easy-install.pth file

Installed /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/seaborn-0.11.2-py3.7.egg
Searching for cmasher
Reading https://pypi.org/simple/cmasher/
Downloading https://files.pythonhosted.org/packages/c3/4c/f2c9342f82c7d705463867818952bab39b67998a5ef600a13a7f1ea23784/cmasher-1.6.3-py3-none-any.whl#sha256=5d856d24e03f04fb7b2b38c7ca4a8081516b2774d0fa30c6140e94d5153e8066
Best match: cmasher 1.6.3
Processing cmasher-1.6.3-py3-none-any.whl
Installing cmasher-1.6.3-py3-none-any.whl to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages
Adding cmasher 1.6.3 to easy-install.pth file
Installing cmr script to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/bin

Installed /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/cmasher-1.6.3-py3.7.egg
Searching for cmocean
Reading https://pypi.org/simple/cmocean/
Downloading https://files.pythonhosted.org/packages/48/02/d0f19b00b252fd972e3daec05be73aa811091528f21b90442a15d6a96d89/cmocean-2.0-py3-none-any.whl#sha256=1753f004d84d21c89e76106b2f56e2847808951b2373843bece4dcf532e1a91f
Best match: cmocean 2.0
Processing cmocean-2.0-py3-none-any.whl
Installing cmocean-2.0-py3-none-any.whl to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages
Adding cmocean 2.0 to easy-install.pth file

Installed /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/cmocean-2.0-py3.7.egg
Searching for networkx>=2.3
Reading https://pypi.org/simple/networkx/
Downloading https://files.pythonhosted.org/packages/f6/34/4913f651b8e178dde5abcf8d62495e4dcd0757a9a6840f1b1f7a290afaea/networkx-2.7.1-py3-none-any.whl#sha256=011e85d277c89681e8fa661cf5ff0743443445049b0b68789ad55ef09340c6e0
Best match: networkx 2.7.1
Processing networkx-2.7.1-py3-none-any.whl
Installing networkx-2.7.1-py3-none-any.whl to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages
Adding networkx 2.7.1 to easy-install.pth file

Installed /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/networkx-2.7.1-py3.7.egg
Searching for pandas>=1.2.3
Reading https://pypi.org/simple/pandas/
Downloading https://files.pythonhosted.org/packages/c4/eb/cfa96ba42695b3c28d4864a796d492f188471dd536df7e5e5e0c54b629a6/pandas-1.4.1.tar.gz#sha256=8db93ec98ac7cb5f8ac1420c10f5e3c43533153f253fe7fb6d891cf5aa2b80d2
Best match: pandas 1.4.1
Processing pandas-1.4.1.tar.gz
Writing /tmp/easy_install-ccgpiw6f/pandas-1.4.1/setup.cfg
Running pandas-1.4.1/setup.py -q bdist_egg --dist-dir /tmp/easy_install-ccgpiw6f/pandas-1.4.1/egg-dist-tmp-_9esmm5w
Traceback (most recent call last):
  File "/home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/setuptools/sandbox.py", line 156, in save_modules
    yield saved
  File "/home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/setuptools/sandbox.py", line 198, in setup_context
    yield
  File "/home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/setuptools/sandbox.py", line 259, in run_setup
    _execfile(setup_script, ns)
  File "/home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/setuptools/sandbox.py", line 46, in _execfile
    exec(code, globals, locals)
  File "/tmp/easy_install-ccgpiw6f/pandas-1.4.1/setup.py", line 651, in <module>
  File "/tmp/easy_install-ccgpiw6f/pandas-1.4.1/setup.py", line 415, in maybe_cythonize
RuntimeError: Cannot cythonize without Cython installed.

During handling of the above exception, another exception occurred:

Traceback (most recent call last):
  File "./setup.py", line 60, in <module>
    "jsbeautifier"
  File "/home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/setuptools/__init__.py", line 153, in setup
    return distutils.core.setup(**attrs)
  File "/home/docs/.pyenv/versions/3.7.9/lib/python3.7/distutils/core.py", line 148, in setup
    dist.run_commands()
  File "/home/docs/.pyenv/versions/3.7.9/lib/python3.7/distutils/dist.py", line 966, in run_commands
    self.run_command(cmd)
  File "/home/docs/.pyenv/versions/3.7.9/lib/python3.7/distutils/dist.py", line 985, in run_command
    cmd_obj.run()
  File "/home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/setuptools/command/install.py", line 67, in run
    self.do_egg_install()
  File "/home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/setuptools/command/install.py", line 117, in do_egg_install
    cmd.run(show_deprecation=False)
  File "/home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/setuptools/command/easy_install.py", line 408, in run
    self.easy_install(spec, not self.no_deps)
  File "/home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/setuptools/command/easy_install.py", line 650, in easy_install
    return self.install_item(None, spec, tmpdir, deps, True)
  File "/home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/setuptools/command/easy_install.py", line 697, in install_item
    self.process_distribution(spec, dist, deps)
  File "/home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/setuptools/command/easy_install.py", line 745, in process_distribution
    [requirement], self.local_index, self.easy_install
  File "/home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/pkg_resources/__init__.py", line 768, in resolve
    replace_conflicting=replace_conflicting
  File "/home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/pkg_resources/__init__.py", line 1051, in best_match
    return self.obtain(req, installer)
  File "/home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/pkg_resources/__init__.py", line 1063, in obtain
    return installer(requirement)
  File "/home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/setuptools/command/easy_install.py", line 669, in easy_install
    return self.install_item(spec, dist.location, tmpdir, deps)
  File "/home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/setuptools/command/easy_install.py", line 695, in install_item
    dists = self.install_eggs(spec, download, tmpdir)
  File "/home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/setuptools/command/easy_install.py", line 890, in install_eggs
    return self.build_and_install(setup_script, setup_base)
  File "/home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/setuptools/command/easy_install.py", line 1162, in build_and_install
    self.run_setup(setup_script, setup_base, args)
  File "/home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/setuptools/command/easy_install.py", line 1146, in run_setup
    run_setup(setup_script, args)
  File "/home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/setuptools/sandbox.py", line 262, in run_setup
    raise
  File "/home/docs/.pyenv/versions/3.7.9/lib/python3.7/contextlib.py", line 130, in __exit__
    self.gen.throw(type, value, traceback)
  File "/home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/setuptools/sandbox.py", line 198, in setup_context
    yield
  File "/home/docs/.pyenv/versions/3.7.9/lib/python3.7/contextlib.py", line 130, in __exit__
    self.gen.throw(type, value, traceback)
  File "/home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/setuptools/sandbox.py", line 169, in save_modules
    saved_exc.resume()
  File "/home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/setuptools/sandbox.py", line 143, in resume
    raise exc.with_traceback(self._tb)
  File "/home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/setuptools/sandbox.py", line 156, in save_modules
    yield saved
  File "/home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/setuptools/sandbox.py", line 198, in setup_context
    yield
  File "/home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/setuptools/sandbox.py", line 259, in run_setup
    _execfile(setup_script, ns)
  File "/home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/setuptools/sandbox.py", line 46, in _execfile
    exec(code, globals, locals)
  File "/tmp/easy_install-ccgpiw6f/pandas-1.4.1/setup.py", line 651, in <module>
  File "/tmp/easy_install-ccgpiw6f/pandas-1.4.1/setup.py", line 415, in maybe_cythonize
RuntimeError: Cannot cythonize without Cython installed.