Read the Docs build information Build id: 461088 Project: institute-for-disease-modeling-synthpops-test Version: latest Commit: a20aa81b394b865238d911d9860e0997d710ee17 Date: 2020-10-24T17:23:55.606922Z State: finished Success: False [rtd-command-info] start-time: 2020-10-24T17:23:56.802256Z, end-time: 2020-10-24T17:24:03.794495Z, duration: 6, exit-code: 0 git clone --no-single-branch --depth 50 git@github.com:InstituteforDiseaseModeling/synthpops.git . Cloning into '.'... Warning: Permanently added 'github.com,140.82.112.4' (RSA) to the list of known hosts. [rtd-command-info] start-time: 2020-10-24T17:24:04.152580Z, end-time: 2020-10-24T17:24:05.550566Z, duration: 1, exit-code: 0 git checkout --force origin/master Note: checking out 'origin/master'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by performing another checkout. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -b with the checkout command again. Example: git checkout -b HEAD is now at a20aa81 Merge pull request #192 from amath-idm/trim-memory [rtd-command-info] start-time: 2020-10-24T17:24:05.680743Z, end-time: 2020-10-24T17:24:05.733524Z, duration: 0, exit-code: 0 git clean -d -f -f [rtd-command-info] start-time: 2020-10-24T17:24:07.372865Z, end-time: 2020-10-24T17:24:11.159825Z, duration: 3, exit-code: 0 python3.7 -mvirtualenv Using base prefix '/home/docs/.pyenv/versions/3.7.9' New python executable in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/bin/python3.7 Also creating executable in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/bin/python Installing setuptools, pip, wheel... done. [rtd-command-info] start-time: 2020-10-24T17:24:11.289740Z, end-time: 2020-10-24T17:24:11.965421Z, duration: 0, exit-code: 0 python -m pip install --upgrade --no-cache-dir pip Requirement already up-to-date: pip in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages (20.2.4) [rtd-command-info] start-time: 2020-10-24T17:24:12.142981Z, end-time: 2020-10-24T17:24:20.293595Z, duration: 8, exit-code: 0 python -m pip install --upgrade --no-cache-dir setuptools==41.0.1 docutils==0.14 mock==1.0.1 pillow==5.4.1 alabaster>=0.7,<0.8,!=0.7.5 commonmark==0.8.1 recommonmark==0.5.0 sphinx<2 sphinx-rtd-theme<0.5 readthedocs-sphinx-ext<1.1 Collecting setuptools==41.0.1 Downloading setuptools-41.0.1-py2.py3-none-any.whl (575 kB) Collecting docutils==0.14 Downloading docutils-0.14-py3-none-any.whl (543 kB) Collecting mock==1.0.1 Downloading mock-1.0.1.tar.gz (818 kB) Collecting pillow==5.4.1 Downloading Pillow-5.4.1-cp37-cp37m-manylinux1_x86_64.whl (2.0 MB) Collecting alabaster!=0.7.5,<0.8,>=0.7 Downloading alabaster-0.7.12-py2.py3-none-any.whl (14 kB) Collecting commonmark==0.8.1 Downloading commonmark-0.8.1-py2.py3-none-any.whl (47 kB) Collecting recommonmark==0.5.0 Downloading recommonmark-0.5.0-py2.py3-none-any.whl (9.8 kB) Collecting sphinx<2 Downloading Sphinx-1.8.5-py2.py3-none-any.whl (3.1 MB) Collecting sphinx-rtd-theme<0.5 Downloading sphinx_rtd_theme-0.4.3-py2.py3-none-any.whl (6.4 MB) Collecting readthedocs-sphinx-ext<1.1 Downloading readthedocs_sphinx_ext-1.0.4-py2.py3-none-any.whl (28 kB) Collecting future Downloading future-0.18.2.tar.gz (829 kB) Collecting packaging Downloading packaging-20.4-py2.py3-none-any.whl (37 kB) Collecting snowballstemmer>=1.1 Downloading snowballstemmer-2.0.0-py2.py3-none-any.whl (97 kB) Collecting imagesize Downloading imagesize-1.2.0-py2.py3-none-any.whl (4.8 kB) Collecting sphinxcontrib-websupport Downloading sphinxcontrib_websupport-1.2.4-py2.py3-none-any.whl (39 kB) Collecting six>=1.5 Downloading six-1.15.0-py2.py3-none-any.whl (10 kB) Collecting babel!=2.0,>=1.3 Downloading Babel-2.8.0-py2.py3-none-any.whl (8.6 MB) Collecting Jinja2>=2.3 Downloading Jinja2-2.11.2-py2.py3-none-any.whl (125 kB) Collecting requests>=2.0.0 Downloading requests-2.24.0-py2.py3-none-any.whl (61 kB) Collecting Pygments>=2.0 Downloading Pygments-2.7.2-py3-none-any.whl (948 kB) Collecting pyparsing>=2.0.2 Downloading pyparsing-2.4.7-py2.py3-none-any.whl (67 kB) Collecting sphinxcontrib-serializinghtml Downloading sphinxcontrib_serializinghtml-1.1.4-py2.py3-none-any.whl (89 kB) Collecting pytz>=2015.7 Downloading pytz-2020.1-py2.py3-none-any.whl (510 kB) Collecting MarkupSafe>=0.23 Downloading MarkupSafe-1.1.1-cp37-cp37m-manylinux1_x86_64.whl (27 kB) Collecting certifi>=2017.4.17 Downloading certifi-2020.6.20-py2.py3-none-any.whl (156 kB) Collecting chardet<4,>=3.0.2 Downloading chardet-3.0.4-py2.py3-none-any.whl (133 kB) Collecting idna<3,>=2.5 Downloading idna-2.10-py2.py3-none-any.whl (58 kB) Collecting urllib3!=1.25.0,!=1.25.1,<1.26,>=1.21.1 Downloading urllib3-1.25.11-py2.py3-none-any.whl (127 kB) Building wheels for collected packages: mock, future Building wheel for mock (setup.py): started Building wheel for mock (setup.py): finished with status 'done' Created wheel for mock: filename=mock-1.0.1-py3-none-any.whl size=23754 sha256=9df0becdb7d8ae7673667958d41f753eac5ad8fa0de8f5de4bbff512a65c4baf Stored in directory: /tmp/pip-ephem-wheel-cache-wti2d9od/wheels/16/03/37/f0a64ab894c9102906f192db1a4071b7592292ad661563c69b Building wheel for future (setup.py): started Building wheel for future (setup.py): finished with status 'done' Created wheel for future: filename=future-0.18.2-py3-none-any.whl size=491059 sha256=6f002155c10735d047917fea02dc76412489c410d060c62ef66c7ca2d5f835ea Stored in directory: /tmp/pip-ephem-wheel-cache-wti2d9od/wheels/56/b0/fe/4410d17b32f1f0c3cf54cdfb2bc04d7b4b8f4ae377e2229ba0 Successfully built mock future Installing collected packages: setuptools, docutils, mock, pillow, alabaster, future, commonmark, pyparsing, six, packaging, snowballstemmer, imagesize, sphinxcontrib-serializinghtml, sphinxcontrib-websupport, pytz, babel, MarkupSafe, Jinja2, certifi, chardet, idna, urllib3, requests, Pygments, sphinx, recommonmark, sphinx-rtd-theme, readthedocs-sphinx-ext Attempting uninstall: setuptools Found existing installation: setuptools 50.3.2 Uninstalling setuptools-50.3.2: Successfully uninstalled setuptools-50.3.2 Successfully installed Jinja2-2.11.2 MarkupSafe-1.1.1 Pygments-2.7.2 alabaster-0.7.12 babel-2.8.0 certifi-2020.6.20 chardet-3.0.4 commonmark-0.8.1 docutils-0.14 future-0.18.2 idna-2.10 imagesize-1.2.0 mock-1.0.1 packaging-20.4 pillow-5.4.1 pyparsing-2.4.7 pytz-2020.1 readthedocs-sphinx-ext-1.0.4 recommonmark-0.5.0 requests-2.24.0 setuptools-41.0.1 six-1.15.0 snowballstemmer-2.0.0 sphinx-1.8.5 sphinx-rtd-theme-0.4.3 sphinxcontrib-serializinghtml-1.1.4 sphinxcontrib-websupport-1.2.4 urllib3-1.25.11 [rtd-command-info] start-time: 2020-10-24T17:24:20.484231Z, end-time: 2020-10-24T17:24:23.329058Z, duration: 2, exit-code: 0 python -m pip install --exists-action=w --no-cache-dir -r docs/requirements.txt Collecting sphinx-rtd-theme>=0.5.0 Downloading sphinx_rtd_theme-0.5.0-py2.py3-none-any.whl (10.8 MB) Collecting sphinxcontrib-napoleon>=0.7 Downloading sphinxcontrib_napoleon-0.7-py2.py3-none-any.whl (17 kB) Collecting sphinx>=3.2.0 Downloading Sphinx-3.2.1-py3-none-any.whl (2.9 MB) Collecting plantweb>=1.2.1 Downloading plantweb-1.2.1-py3-none-any.whl (20 kB) Collecting pockets>=0.3 Downloading pockets-0.9.1-py2.py3-none-any.whl (26 kB) Requirement already satisfied: six>=1.5.2 in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages (from sphinxcontrib-napoleon>=0.7->-r docs/requirements.txt (line 2)) (1.15.0) Collecting sphinxcontrib-qthelp Downloading sphinxcontrib_qthelp-1.0.3-py2.py3-none-any.whl (90 kB) Collecting sphinxcontrib-applehelp Downloading sphinxcontrib_applehelp-1.0.2-py2.py3-none-any.whl (121 kB) Requirement already satisfied: Pygments>=2.0 in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages (from sphinx>=3.2.0->-r docs/requirements.txt (line 3)) (2.7.2) Collecting sphinxcontrib-devhelp Downloading sphinxcontrib_devhelp-1.0.2-py2.py3-none-any.whl (84 kB) Requirement already satisfied: alabaster<0.8,>=0.7 in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages (from sphinx>=3.2.0->-r docs/requirements.txt (line 3)) (0.7.12) Requirement already satisfied: requests>=2.5.0 in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages (from sphinx>=3.2.0->-r docs/requirements.txt (line 3)) (2.24.0) Requirement already satisfied: imagesize in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages (from sphinx>=3.2.0->-r docs/requirements.txt (line 3)) (1.2.0) Requirement already satisfied: setuptools in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages (from sphinx>=3.2.0->-r docs/requirements.txt (line 3)) (41.0.1) Collecting sphinxcontrib-htmlhelp Downloading sphinxcontrib_htmlhelp-1.0.3-py2.py3-none-any.whl (96 kB) Requirement already satisfied: docutils>=0.12 in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages (from sphinx>=3.2.0->-r docs/requirements.txt (line 3)) (0.14) Requirement already satisfied: babel>=1.3 in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages (from sphinx>=3.2.0->-r docs/requirements.txt (line 3)) (2.8.0) Requirement already satisfied: sphinxcontrib-serializinghtml in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages (from sphinx>=3.2.0->-r docs/requirements.txt (line 3)) (1.1.4) Requirement already satisfied: Jinja2>=2.3 in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages (from sphinx>=3.2.0->-r docs/requirements.txt (line 3)) (2.11.2) Requirement already satisfied: packaging in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages (from sphinx>=3.2.0->-r docs/requirements.txt (line 3)) (20.4) Requirement already satisfied: snowballstemmer>=1.1 in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages (from sphinx>=3.2.0->-r docs/requirements.txt (line 3)) (2.0.0) Collecting sphinxcontrib-jsmath Downloading sphinxcontrib_jsmath-1.0.1-py2.py3-none-any.whl (5.1 kB) Requirement already satisfied: chardet<4,>=3.0.2 in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages (from requests>=2.5.0->sphinx>=3.2.0->-r docs/requirements.txt (line 3)) (3.0.4) Requirement already satisfied: certifi>=2017.4.17 in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages (from requests>=2.5.0->sphinx>=3.2.0->-r docs/requirements.txt (line 3)) (2020.6.20) Requirement already satisfied: urllib3!=1.25.0,!=1.25.1,<1.26,>=1.21.1 in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages (from requests>=2.5.0->sphinx>=3.2.0->-r docs/requirements.txt (line 3)) (1.25.11) Requirement already satisfied: idna<3,>=2.5 in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages (from requests>=2.5.0->sphinx>=3.2.0->-r docs/requirements.txt (line 3)) (2.10) Requirement already satisfied: pytz>=2015.7 in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages (from babel>=1.3->sphinx>=3.2.0->-r docs/requirements.txt (line 3)) (2020.1) Requirement already satisfied: MarkupSafe>=0.23 in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages (from Jinja2>=2.3->sphinx>=3.2.0->-r docs/requirements.txt (line 3)) (1.1.1) Requirement already satisfied: pyparsing>=2.0.2 in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages (from packaging->sphinx>=3.2.0->-r docs/requirements.txt (line 3)) (2.4.7) Installing collected packages: sphinxcontrib-qthelp, sphinxcontrib-applehelp, sphinxcontrib-devhelp, sphinxcontrib-htmlhelp, sphinxcontrib-jsmath, sphinx, sphinx-rtd-theme, pockets, sphinxcontrib-napoleon, plantweb Attempting uninstall: sphinx Found existing installation: Sphinx 1.8.5 Uninstalling Sphinx-1.8.5: Successfully uninstalled Sphinx-1.8.5 Attempting uninstall: sphinx-rtd-theme Found existing installation: sphinx-rtd-theme 0.4.3 Uninstalling sphinx-rtd-theme-0.4.3: Successfully uninstalled sphinx-rtd-theme-0.4.3 Successfully installed plantweb-1.2.1 pockets-0.9.1 sphinx-3.2.1 sphinx-rtd-theme-0.5.0 sphinxcontrib-applehelp-1.0.2 sphinxcontrib-devhelp-1.0.2 sphinxcontrib-htmlhelp-1.0.3 sphinxcontrib-jsmath-1.0.1 sphinxcontrib-napoleon-0.7 sphinxcontrib-qthelp-1.0.3 [rtd-command-info] start-time: 2020-10-24T17:24:23.447403Z, end-time: 2020-10-24T17:24:26.605150Z, duration: 3, exit-code: 1 python ./setup.py install --force running install running bdist_egg running egg_info creating synthpops.egg-info writing synthpops.egg-info/PKG-INFO writing dependency_links to synthpops.egg-info/dependency_links.txt writing requirements to synthpops.egg-info/requires.txt writing top-level names to synthpops.egg-info/top_level.txt writing manifest file 'synthpops.egg-info/SOURCES.txt' reading manifest file 'synthpops.egg-info/SOURCES.txt' writing manifest file 'synthpops.egg-info/SOURCES.txt' installing library code to build/bdist.linux-x86_64/egg running install_lib running build_py creating build creating build/lib creating build/lib/synthpops copying synthpops/read_write.py -> build/lib/synthpops copying synthpops/__init__.py -> build/lib/synthpops copying synthpops/base.py -> build/lib/synthpops copying synthpops/school_modules.py -> build/lib/synthpops copying synthpops/data_distributions.py -> build/lib/synthpops copying synthpops/config.py -> build/lib/synthpops copying synthpops/sampling.py -> build/lib/synthpops copying synthpops/version.py -> build/lib/synthpops copying synthpops/long_term_care_facilities.py -> build/lib/synthpops copying synthpops/api.py -> build/lib/synthpops copying synthpops/contacts.py -> build/lib/synthpops copying synthpops/contact_networks.py -> build/lib/synthpops copying synthpops/plot_tools.py -> build/lib/synthpops creating build/bdist.linux-x86_64 creating build/bdist.linux-x86_64/egg creating build/bdist.linux-x86_64/egg/synthpops copying build/lib/synthpops/read_write.py -> build/bdist.linux-x86_64/egg/synthpops copying build/lib/synthpops/__init__.py -> build/bdist.linux-x86_64/egg/synthpops copying build/lib/synthpops/base.py -> build/bdist.linux-x86_64/egg/synthpops copying build/lib/synthpops/school_modules.py -> build/bdist.linux-x86_64/egg/synthpops copying build/lib/synthpops/data_distributions.py -> build/bdist.linux-x86_64/egg/synthpops copying build/lib/synthpops/config.py -> build/bdist.linux-x86_64/egg/synthpops copying build/lib/synthpops/sampling.py -> build/bdist.linux-x86_64/egg/synthpops copying build/lib/synthpops/version.py -> build/bdist.linux-x86_64/egg/synthpops copying build/lib/synthpops/long_term_care_facilities.py -> build/bdist.linux-x86_64/egg/synthpops copying build/lib/synthpops/api.py -> build/bdist.linux-x86_64/egg/synthpops copying build/lib/synthpops/contacts.py -> build/bdist.linux-x86_64/egg/synthpops copying build/lib/synthpops/contact_networks.py -> build/bdist.linux-x86_64/egg/synthpops copying build/lib/synthpops/plot_tools.py -> build/bdist.linux-x86_64/egg/synthpops byte-compiling build/bdist.linux-x86_64/egg/synthpops/read_write.py to read_write.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/synthpops/__init__.py to __init__.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/synthpops/base.py to base.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/synthpops/school_modules.py to school_modules.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/synthpops/data_distributions.py to data_distributions.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/synthpops/config.py to config.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/synthpops/sampling.py to sampling.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/synthpops/version.py to version.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/synthpops/long_term_care_facilities.py to long_term_care_facilities.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/synthpops/api.py to api.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/synthpops/contacts.py to contacts.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/synthpops/contact_networks.py to contact_networks.cpython-37.pyc byte-compiling build/bdist.linux-x86_64/egg/synthpops/plot_tools.py to plot_tools.cpython-37.pyc creating build/bdist.linux-x86_64/egg/EGG-INFO copying synthpops.egg-info/PKG-INFO -> build/bdist.linux-x86_64/egg/EGG-INFO copying synthpops.egg-info/SOURCES.txt -> build/bdist.linux-x86_64/egg/EGG-INFO copying synthpops.egg-info/dependency_links.txt -> build/bdist.linux-x86_64/egg/EGG-INFO copying synthpops.egg-info/requires.txt -> build/bdist.linux-x86_64/egg/EGG-INFO copying synthpops.egg-info/top_level.txt -> build/bdist.linux-x86_64/egg/EGG-INFO zip_safe flag not set; analyzing archive contents... synthpops.__pycache__.config.cpython-37: module references __file__ creating dist creating 'dist/synthpops-1.2.0-py3.7.egg' and adding 'build/bdist.linux-x86_64/egg' to it removing 'build/bdist.linux-x86_64/egg' (and everything under it) Processing synthpops-1.2.0-py3.7.egg creating /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/synthpops-1.2.0-py3.7.egg Extracting synthpops-1.2.0-py3.7.egg to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages Adding synthpops 1.2.0 to easy-install.pth file Installed /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/synthpops-1.2.0-py3.7.egg Processing dependencies for synthpops==1.2.0 Searching for pydot Reading https://pypi.org/simple/pydot/ Downloading https://files.pythonhosted.org/packages/33/d1/b1479a770f66d962f545c2101630ce1d5592d90cb4f083d38862e93d16d2/pydot-1.4.1-py2.py3-none-any.whl#sha256=67be714300c78fda5fd52f79ec994039e3f76f074948c67b5ff539b433ad354f Best match: pydot 1.4.1 Processing pydot-1.4.1-py2.py3-none-any.whl Installing pydot-1.4.1-py2.py3-none-any.whl to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages writing requirements to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/pydot-1.4.1-py3.7.egg/EGG-INFO/requires.txt Adding pydot 1.4.1 to easy-install.pth file Installed /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/pydot-1.4.1-py3.7.egg Searching for graphviz Reading https://pypi.org/simple/graphviz/ Downloading https://files.pythonhosted.org/packages/1f/15/829918d2078de497d9905cb620be4e17caa75829d741a7c1649257316ea5/graphviz-0.14.2-py2.py3-none-any.whl#sha256=78b28ee9f777da6c5e0b9e1bb1adba3975ec74c6ce85f001cbe964eb0b24d43e Best match: graphviz 0.14.2 Processing graphviz-0.14.2-py2.py3-none-any.whl Installing graphviz-0.14.2-py2.py3-none-any.whl to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages writing requirements to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/graphviz-0.14.2-py3.7.egg/EGG-INFO/requires.txt Adding graphviz 0.14.2 to easy-install.pth file Installed /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/graphviz-0.14.2-py3.7.egg Searching for seaborn Reading https://pypi.org/simple/seaborn/ Downloading https://files.pythonhosted.org/packages/bc/45/5118a05b0d61173e6eb12bc5804f0fbb6f196adb0a20e0b16efc2b8e98be/seaborn-0.11.0-py3-none-any.whl#sha256=62439a38482decdb263a8339f54ecb9823995ad8716abc830e91ca0753201e70 Best match: seaborn 0.11.0 Processing seaborn-0.11.0-py3-none-any.whl Installing seaborn-0.11.0-py3-none-any.whl to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages writing requirements to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/seaborn-0.11.0-py3.7.egg/EGG-INFO/requires.txt Adding seaborn 0.11.0 to easy-install.pth file Installed /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/seaborn-0.11.0-py3.7.egg Searching for cmasher Reading https://pypi.org/simple/cmasher/ Downloading https://files.pythonhosted.org/packages/95/0b/e947a24d15a53e62e0a8f7d180ca574e7b17bed160f1015120d76a15fce5/cmasher-1.5.4-py3-none-any.whl#sha256=9a740c602e936c6d8f4a9081d8f86dbd1ec038cf238a5331eb946ea911e68e5a Best match: cmasher 1.5.4 Processing cmasher-1.5.4-py3-none-any.whl Installing cmasher-1.5.4-py3-none-any.whl to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages writing requirements to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/cmasher-1.5.4-py3.7.egg/EGG-INFO/requires.txt Adding cmasher 1.5.4 to easy-install.pth file Installing cmr script to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/bin Installed /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/cmasher-1.5.4-py3.7.egg Searching for cmocean Reading https://pypi.org/simple/cmocean/ Downloading https://files.pythonhosted.org/packages/48/02/d0f19b00b252fd972e3daec05be73aa811091528f21b90442a15d6a96d89/cmocean-2.0-py3-none-any.whl#sha256=1753f004d84d21c89e76106b2f56e2847808951b2373843bece4dcf532e1a91f Best match: cmocean 2.0 Processing cmocean-2.0-py3-none-any.whl Installing cmocean-2.0-py3-none-any.whl to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages writing requirements to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/cmocean-2.0-py3.7.egg/EGG-INFO/requires.txt Adding cmocean 2.0 to easy-install.pth file Installed /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/cmocean-2.0-py3.7.egg Searching for networkx Reading https://pypi.org/simple/networkx/ Downloading https://files.pythonhosted.org/packages/9b/cd/dc52755d30ba41c60243235460961fc28022e5b6731f16c268667625baea/networkx-2.5-py3-none-any.whl#sha256=8c5812e9f798d37c50570d15c4a69d5710a18d77bafc903ee9c5fba7454c616c Best match: networkx 2.5 Processing networkx-2.5-py3-none-any.whl Installing networkx-2.5-py3-none-any.whl to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages writing requirements to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/networkx-2.5-py3.7.egg/EGG-INFO/requires.txt Adding networkx 2.5 to easy-install.pth file Installed /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/networkx-2.5-py3.7.egg Searching for numba Reading https://pypi.org/simple/numba/ Downloading https://files.pythonhosted.org/packages/5e/81/6fd1dd064bcf71a79da109e8966a39e2da61d68bf0bd1e0839fa997f8c41/numba-0.51.2.tar.gz#sha256=16bd59572114adbf5f600ea383880d7b2071ae45477e84a24994e089ea390768 Best match: numba 0.51.2 Processing numba-0.51.2.tar.gz Writing /tmp/easy_install-izmooppo/numba-0.51.2/setup.cfg Running numba-0.51.2/setup.py -q bdist_egg --dist-dir /tmp/easy_install-izmooppo/numba-0.51.2/egg-dist-tmp-gkkob8_s Traceback (most recent call last): File "/home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/setuptools/sandbox.py", line 154, in save_modules yield saved File "/home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/setuptools/sandbox.py", line 195, in setup_context yield File "/home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/setuptools/sandbox.py", line 250, in run_setup _execfile(setup_script, ns) File "/home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/setuptools/sandbox.py", line 45, in _execfile exec(code, globals, locals) File "/tmp/easy_install-izmooppo/numba-0.51.2/setup.py", line 354, in File "/tmp/easy_install-izmooppo/numba-0.51.2/setup.py", line 87, in get_ext_modules ModuleNotFoundError: No module named 'numpy' During handling of the above exception, another exception occurred: Traceback (most recent call last): File "./setup.py", line 51, in "pydot", File "/home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/setuptools/__init__.py", line 145, in setup return distutils.core.setup(**attrs) File "/home/docs/.pyenv/versions/3.7.9/lib/python3.7/distutils/core.py", line 148, in setup dist.run_commands() File "/home/docs/.pyenv/versions/3.7.9/lib/python3.7/distutils/dist.py", line 966, in run_commands self.run_command(cmd) File "/home/docs/.pyenv/versions/3.7.9/lib/python3.7/distutils/dist.py", line 985, in run_command cmd_obj.run() File "/home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/setuptools/command/install.py", line 67, in run self.do_egg_install() File "/home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/setuptools/command/install.py", line 117, in do_egg_install cmd.run() File "/home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/setuptools/command/easy_install.py", line 418, in run self.easy_install(spec, not self.no_deps) File "/home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/setuptools/command/easy_install.py", line 660, in easy_install return self.install_item(None, spec, tmpdir, deps, True) File "/home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/setuptools/command/easy_install.py", line 707, in install_item self.process_distribution(spec, dist, deps) File "/home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/setuptools/command/easy_install.py", line 752, in process_distribution [requirement], self.local_index, self.easy_install File "/home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/pkg_resources/__init__.py", line 782, in resolve replace_conflicting=replace_conflicting File "/home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/pkg_resources/__init__.py", line 1065, in best_match return self.obtain(req, installer) File "/home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/pkg_resources/__init__.py", line 1077, in obtain return installer(requirement) File "/home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/setuptools/command/easy_install.py", line 679, in easy_install return self.install_item(spec, dist.location, tmpdir, deps) File "/home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/setuptools/command/easy_install.py", line 705, in install_item dists = self.install_eggs(spec, download, tmpdir) File "/home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/setuptools/command/easy_install.py", line 890, in install_eggs return self.build_and_install(setup_script, setup_base) File "/home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/setuptools/command/easy_install.py", line 1158, in build_and_install self.run_setup(setup_script, setup_base, args) File "/home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/setuptools/command/easy_install.py", line 1144, in run_setup run_setup(setup_script, args) File "/home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/setuptools/sandbox.py", line 253, in run_setup raise File "/home/docs/.pyenv/versions/3.7.9/lib/python3.7/contextlib.py", line 130, in __exit__ self.gen.throw(type, value, traceback) File "/home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/setuptools/sandbox.py", line 195, in setup_context yield File "/home/docs/.pyenv/versions/3.7.9/lib/python3.7/contextlib.py", line 130, in __exit__ self.gen.throw(type, value, traceback) File "/home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/setuptools/sandbox.py", line 166, in save_modules saved_exc.resume() File "/home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/setuptools/sandbox.py", line 141, in resume six.reraise(type, exc, self._tb) File "/home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/setuptools/_vendor/six.py", line 685, in reraise raise value.with_traceback(tb) File "/home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/setuptools/sandbox.py", line 154, in save_modules yield saved File "/home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/setuptools/sandbox.py", line 195, in setup_context yield File "/home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/setuptools/sandbox.py", line 250, in run_setup _execfile(setup_script, ns) File "/home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-synthpops-test/envs/latest/lib/python3.7/site-packages/setuptools/sandbox.py", line 45, in _execfile exec(code, globals, locals) File "/tmp/easy_install-izmooppo/numba-0.51.2/setup.py", line 354, in File "/tmp/easy_install-izmooppo/numba-0.51.2/setup.py", line 87, in get_ext_modules ModuleNotFoundError: No module named 'numpy'