Read the Docs build information Build id: 3810341 Project: institute-for-disease-modeling-hpvsim Version: latest Commit: 9eef788e132f7a559a328127810787da5e512d7e Date: 2026-03-07T02:21:22.457458Z State: cancelled Success: False [rtd-command-info] start-time: 2026-03-07T02:21:23.227431Z, end-time: 2026-03-07T02:21:23.741271Z, duration: 0, exit-code: 0 git clone --depth 1 https://github.com/starsimhub/hpvsim.git . Cloning into '.'... [rtd-command-info] start-time: 2026-03-07T02:21:23.826480Z, end-time: 2026-03-07T02:21:24.912341Z, duration: 1, exit-code: 0 git fetch origin --force --prune --prune-tags --depth 50 refs/heads/main:refs/remotes/origin/main From https://github.com/starsimhub/hpvsim * [new tag] v0.4.16 -> v0.4.16 * [new tag] v0.4.5 -> v0.4.5 * [new tag] v1.0.0 -> v1.0.0 * [new tag] v1.1.1 -> v1.1.1 * [new tag] v1.2.0 -> v1.2.0 * [new tag] v1.2.2 -> v1.2.2 * [new tag] v1.2.3 -> v1.2.3 * [new tag] v1.2.4 -> v1.2.4 * [new tag] v1.2.5 -> v1.2.5 * [new tag] v1.2.6 -> v1.2.6 * [new tag] v1.2.7 -> v1.2.7 * [new tag] v2.0.0 -> v2.0.0 * [new tag] v2.1.0 -> v2.1.0 [rtd-command-info] start-time: 2026-03-07T02:21:25.721692Z, end-time: 2026-03-07T02:21:25.773841Z, duration: 0, exit-code: 0 git checkout --force origin/main Note: switching to 'origin/main'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by switching back to a branch. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -c with the switch command. Example: git switch -c Or undo this operation with: git switch - Turn off this advice by setting config variable advice.detachedHead to false HEAD is now at 9eef788 Merge pull request #29 from starsimhub/dependabot/pip/docs/nbconvert-7.17.0 [rtd-command-info] start-time: 2026-03-07T02:21:25.859455Z, end-time: 2026-03-07T02:21:25.896339Z, duration: 0, exit-code: 0 cat .readthedocs.yaml # .readthedocs.yaml # Read the Docs configuration file # See https://docs.readthedocs.io/en/stable/config-file/v2.html for details # Required version: 2 # Set the version of Python and other tools you might need build: os: ubuntu-20.04 tools: python: "3.9" # Build documentation in the docs/ directory with Sphinx sphinx: configuration: docs/conf.py # If using Sphinx, optionally build your docs in additional formats such as PDF # formats: # Optionally declare the Python requirements required to build your docs python: install: - requirements: docs/requirements.txt - method: pip path: . [rtd-command-info] start-time: 2026-03-07T02:21:33.396754Z, end-time: 2026-03-07T02:21:33.643011Z, duration: 0, exit-code: 0 asdf global python 3.9.22 [rtd-command-info] start-time: 2026-03-07T02:21:34.450959Z, end-time: 2026-03-07T02:21:35.157917Z, duration: 0, exit-code: 0 python -mvirtualenv $READTHEDOCS_VIRTUALENV_PATH created virtual environment CPython3.9.22.final.0-64 in 292ms creator CPython3Posix(dest=/home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-hpvsim/envs/latest, clear=False, no_vcs_ignore=False, global=False) seeder FromAppData(download=False, pip=bundle, setuptools=bundle, wheel=bundle, via=copy, app_data_dir=/home/docs/.local/share/virtualenv) added seed packages: pip==23.1, setuptools==67.6.1, wheel==0.40.0 activators BashActivator,CShellActivator,FishActivator,NushellActivator,PowerShellActivator,PythonActivator [rtd-command-info] start-time: 2026-03-07T02:21:35.240857Z, end-time: 2026-03-07T02:21:41.709764Z, duration: 6, exit-code: 0 python -m pip install --upgrade --no-cache-dir pip setuptools Looking in indexes: https://pypi.org/simple, https://packages.idmod.org/api/pypi/pypi-production/simple Requirement already satisfied: pip in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-hpvsim/envs/latest/lib/python3.9/site-packages (23.1) Collecting pip Downloading https://packages.idmod.org/api/pypi/pypi-production/packages/packages/de/f0/c81e05b613866b76d2d1066490adf1a3dbc4ee9d9c839961c3fc8a6997af/pip-26.0.1-py3-none-any.whl (1.8 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 1.8/1.8 MB 13.6 MB/s eta 0:00:00 Requirement already satisfied: setuptools in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-hpvsim/envs/latest/lib/python3.9/site-packages (67.6.1) Collecting setuptools Downloading https://packages.idmod.org/api/pypi/pypi-production/packages/packages/e1/c6/76dc613121b793286a3f91621d7b75a2b493e0390ddca50f11993eadf192/setuptools-82.0.0-py3-none-any.whl (1.0 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 1.0/1.0 MB 16.2 MB/s eta 0:00:00 Installing collected packages: setuptools, pip Attempting uninstall: setuptools Found existing installation: setuptools 67.6.1 Uninstalling setuptools-67.6.1: Successfully uninstalled setuptools-67.6.1 Attempting uninstall: pip Found existing installation: pip 23.1 Uninstalling pip-23.1: Successfully uninstalled pip-23.1 Successfully installed pip-26.0.1 setuptools-82.0.0 [rtd-command-info] start-time: 2026-03-07T02:21:41.790298Z, end-time: 2026-03-07T02:21:48.277777Z, duration: 6, exit-code: 0 python -m pip install --upgrade --no-cache-dir sphinx Looking in indexes: https://pypi.org/simple, https://packages.idmod.org/api/pypi/pypi-production/simple Collecting sphinx Downloading https://packages.idmod.org/api/pypi/pypi-production/packages/packages/0d/ef/153f6803c5d5f8917dbb7f7fcf6d34a871ede3296fa89c2c703f5f8a6c8e/sphinx-7.4.7-py3-none-any.whl (3.4 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 3.4/3.4 MB 15.0 MB/s 0:00:00 Collecting sphinxcontrib-applehelp (from sphinx) Downloading https://packages.idmod.org/api/pypi/pypi-production/packages/packages/5d/85/9ebeae2f76e9e77b952f4b274c27238156eae7979c5421fba91a28f4970d/sphinxcontrib_applehelp-2.0.0-py3-none-any.whl (119 kB) Collecting sphinxcontrib-devhelp (from sphinx) Downloading https://packages.idmod.org/api/pypi/pypi-production/packages/packages/35/7a/987e583882f985fe4d7323774889ec58049171828b58c2217e7f79cdf44e/sphinxcontrib_devhelp-2.0.0-py3-none-any.whl (82 kB) Collecting sphinxcontrib-jsmath (from sphinx) Downloading https://packages.idmod.org/api/pypi/pypi-production/packages/packages/c2/42/4c8646762ee83602e3fb3fbe774c2fac12f317deb0b5dbeeedd2d3ba4b77/sphinxcontrib_jsmath-1.0.1-py2.py3-none-any.whl (5.1 kB) Collecting sphinxcontrib-htmlhelp>=2.0.0 (from sphinx) Downloading https://packages.idmod.org/api/pypi/pypi-production/packages/packages/0a/7b/18a8c0bcec9182c05a0b3ec2a776bba4ead82750a55ff798e8d406dae604/sphinxcontrib_htmlhelp-2.1.0-py3-none-any.whl (98 kB) Collecting sphinxcontrib-serializinghtml>=1.1.9 (from sphinx) Downloading https://packages.idmod.org/api/pypi/pypi-production/packages/packages/52/a7/d2782e4e3f77c8450f727ba74a8f12756d5ba823d81b941f1b04da9d033a/sphinxcontrib_serializinghtml-2.0.0-py3-none-any.whl (92 kB) Collecting sphinxcontrib-qthelp (from sphinx) Downloading https://packages.idmod.org/api/pypi/pypi-production/packages/packages/27/83/859ecdd180cacc13b1f7e857abf8582a64552ea7a061057a6c716e790fce/sphinxcontrib_qthelp-2.0.0-py3-none-any.whl (88 kB) Collecting Jinja2>=3.1 (from sphinx) Downloading https://packages.idmod.org/api/pypi/pypi-production/packages/packages/62/a1/3d680cbfd5f4b8f15abc1d571870c5fc3e594bb582bc3b64ea099db13e56/jinja2-3.1.6-py3-none-any.whl (134 kB) Collecting Pygments>=2.17 (from sphinx) Downloading https://packages.idmod.org/api/pypi/pypi-production/packages/packages/c7/21/705964c7812476f378728bdf590ca4b771ec72385c533964653c68e86bdc/pygments-2.19.2-py3-none-any.whl (1.2 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 1.2/1.2 MB 15.6 MB/s 0:00:00 Collecting docutils<0.22,>=0.20 (from sphinx) Downloading https://packages.idmod.org/api/pypi/pypi-production/packages/packages/8f/d7/9322c609343d929e75e7e5e6255e614fcc67572cfd083959cdef3b7aad79/docutils-0.21.2-py3-none-any.whl (587 kB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 587.4/587.4 kB 17.6 MB/s 0:00:00 Collecting snowballstemmer>=2.2 (from sphinx) Downloading https://packages.idmod.org/api/pypi/pypi-production/packages/packages/c8/78/3565d011c61f5a43488987ee32b6f3f656e7f107ac2782dd57bdd7d91d9a/snowballstemmer-3.0.1-py3-none-any.whl (103 kB) Collecting babel>=2.13 (from sphinx) Downloading https://packages.idmod.org/api/pypi/pypi-production/packages/packages/77/f5/21d2de20e8b8b0408f0681956ca2c69f1320a3848ac50e6e7f39c6159675/babel-2.18.0-py3-none-any.whl (10.2 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 10.2/10.2 MB 14.9 MB/s 0:00:00 Collecting alabaster~=0.7.14 (from sphinx) Downloading https://packages.idmod.org/api/pypi/pypi-production/packages/packages/32/34/d4e1c02d3bee589efb5dfa17f88ea08bdb3e3eac12bc475462aec52ed223/alabaster-0.7.16-py3-none-any.whl (13 kB) Collecting imagesize>=1.3 (from sphinx) Downloading https://packages.idmod.org/api/pypi/pypi-production/packages/packages/1e/b1/a0662b03103c66cf77101a187f396ea91167cd9b7d5d3a2e465ad2c7ee9b/imagesize-1.5.0-py2.py3-none-any.whl (5.8 kB) Collecting requests>=2.30.0 (from sphinx) Downloading https://packages.idmod.org/api/pypi/pypi-production/packages/packages/1e/db/4254e3eabe8020b458f1a747140d32277ec7a271daf1d235b70dc0b4e6e3/requests-2.32.5-py3-none-any.whl (64 kB) Collecting packaging>=23.0 (from sphinx) Downloading https://packages.idmod.org/api/pypi/pypi-production/packages/packages/b7/b9/c538f279a4e237a006a2c98387d081e9eb060d203d8ed34467cc0f0b9b53/packaging-26.0-py3-none-any.whl (74 kB) Collecting importlib-metadata>=6.0 (from sphinx) Downloading https://packages.idmod.org/api/pypi/pypi-production/packages/packages/fa/5e/f8e9a1d23b9c20a551a8a02ea3637b4642e22c2626e3a13a9a29cdea99eb/importlib_metadata-8.7.1-py3-none-any.whl (27 kB) Collecting tomli>=2 (from sphinx) Downloading https://packages.idmod.org/api/pypi/pypi-production/packages/packages/23/d1/136eb2cb77520a31e1f64cbae9d33ec6df0d78bdf4160398e86eec8a8754/tomli-2.4.0-py3-none-any.whl (14 kB) Collecting zipp>=3.20 (from importlib-metadata>=6.0->sphinx) Downloading https://packages.idmod.org/api/pypi/pypi-production/packages/packages/2e/54/647ade08bf0db230bfea292f893923872fd20be6ac6f53b2b936ba839d75/zipp-3.23.0-py3-none-any.whl (10 kB) Collecting MarkupSafe>=2.0 (from Jinja2>=3.1->sphinx) Downloading https://packages.idmod.org/api/pypi/pypi-production/packages/packages/6f/bc/4dc914ead3fe6ddaef035341fee0fc956949bbd27335b611829292b89ee2/markupsafe-3.0.3-cp39-cp39-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (20 kB) Collecting charset_normalizer<4,>=2 (from requests>=2.30.0->sphinx) Downloading https://packages.idmod.org/api/pypi/pypi-production/packages/packages/22/34/ed0cfd388dd9106725afc2beb036adbaa167fc0b5a9ee8cd3940757fb060/charset_normalizer-3.4.5-cp39-cp39-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (196 kB) Collecting idna<4,>=2.5 (from requests>=2.30.0->sphinx) Downloading https://packages.idmod.org/api/pypi/pypi-production/packages/packages/0e/61/66938bbb5fc52dbdf84594873d5b51fb1f7c7794e9c0f5bd885f30bc507b/idna-3.11-py3-none-any.whl (71 kB) Collecting urllib3<3,>=1.21.1 (from requests>=2.30.0->sphinx) Downloading https://packages.idmod.org/api/pypi/pypi-production/packages/packages/39/08/aaaad47bc4e9dc8c725e68f9d04865dbcb2052843ff09c97b08904852d84/urllib3-2.6.3-py3-none-any.whl (131 kB) Collecting certifi>=2017.4.17 (from requests>=2.30.0->sphinx) Downloading https://packages.idmod.org/api/pypi/pypi-production/packages/packages/9a/3c/c17fb3ca2d9c3acff52e30b309f538586f9f5b9c9cf454f3845fc9af4881/certifi-2026.2.25-py3-none-any.whl (153 kB) Installing collected packages: zipp, urllib3, tomli, sphinxcontrib-serializinghtml, sphinxcontrib-qthelp, sphinxcontrib-jsmath, sphinxcontrib-htmlhelp, sphinxcontrib-devhelp, sphinxcontrib-applehelp, snowballstemmer, Pygments, packaging, MarkupSafe, imagesize, idna, docutils, charset_normalizer, certifi, babel, alabaster, requests, Jinja2, importlib-metadata, sphinx Successfully installed Jinja2-3.1.6 MarkupSafe-3.0.3 Pygments-2.19.2 alabaster-0.7.16 babel-2.18.0 certifi-2026.2.25 charset_normalizer-3.4.5 docutils-0.21.2 idna-3.11 imagesize-1.5.0 importlib-metadata-8.7.1 packaging-26.0 requests-2.32.5 snowballstemmer-3.0.1 sphinx-7.4.7 sphinxcontrib-applehelp-2.0.0 sphinxcontrib-devhelp-2.0.0 sphinxcontrib-htmlhelp-2.1.0 sphinxcontrib-jsmath-1.0.1 sphinxcontrib-qthelp-2.0.0 sphinxcontrib-serializinghtml-2.0.0 tomli-2.4.0 urllib3-2.6.3 zipp-3.23.0 [rtd-command-info] start-time: None, end-time: None, duration: None, exit-code: None python -m pip install --exists-action=w --no-cache-dir -r docs/requirements.txt