Read the Docs build information Build id: 3468415 Project: institute-for-disease-modeling-emodpy-malaria Version: 109 Commit: c5d7c0cbb3cb672d620e30f01ed963a71e2ebce2 Date: 2025-10-23T19:36:35.875488Z State: finished Success: False [rtd-command-info] start-time: 2025-10-23T19:36:36.656820Z, end-time: 2025-10-23T19:36:38.583851Z, duration: 1, exit-code: 0 git clone --depth 1 https://github.com/EMOD-Hub/emodpy-malaria.git . Cloning into '.'... [rtd-command-info] start-time: 2025-10-23T19:36:38.687526Z, end-time: 2025-10-23T19:36:40.317476Z, duration: 1, exit-code: 0 git fetch origin --force --prune --prune-tags --depth 50 pull/109/head:external-109 From https://github.com/EMOD-Hub/emodpy-malaria * [new ref] refs/pull/109/head -> external-109 * [new tag] v.4.0.0 -> v.4.0.0 * [new tag] v4.0.0 -> v4.0.0 * [new tag] v4.2.0 -> v4.2.0 * [new tag] v4.2.1 -> v4.2.1 [rtd-command-info] start-time: 2025-10-23T19:36:41.026148Z, end-time: 2025-10-23T19:36:41.356886Z, duration: 0, exit-code: 0 git checkout --force c5d7c0cbb3cb672d620e30f01ed963a71e2ebce2 Note: switching to 'c5d7c0cbb3cb672d620e30f01ed963a71e2ebce2'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by switching back to a branch. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -c with the switch command. Example: git switch -c Or undo this operation with: git switch - Turn off this advice by setting config variable advice.detachedHead to false HEAD is now at c5d7c0c updating, expanding tests [rtd-command-info] start-time: 2025-10-23T19:36:41.448122Z, end-time: 2025-10-23T19:36:41.482614Z, duration: 0, exit-code: 0 cat .readthedocs.yml # .readthedocs.yml # Read the Docs configuration file # See https://docs.readthedocs.io/en/stable/config-file/v2.html for details # Required version: 2 # Set the version of Python and other tools you might need build: os: ubuntu-20.04 tools: python: "3.9" # Build documentation in the docs/ directory with Sphinx sphinx: configuration: docs/conf.py fail_on_warning: true # Build documentation with MkDocs #mkdocs: # configuration: mkdocs.yml # Optionally build your docs in additional formats such as PDF formats: - htmlzip # Optionally set the version of Python and requirements required to build your docs python: install: - requirements: requirements.txt - requirements: docs/requirements.txt - method: setuptools path: . # Optionally rank topics in search results, between -10 (lower) and 10 (higher). # 0 is normal rank, not no rank # search: # ranking: [rtd-command-info] start-time: 2025-10-23T19:36:45.640659Z, end-time: 2025-10-23T19:36:45.700595Z, duration: 0, exit-code: 0 asdf global python 3.9.22 [rtd-command-info] start-time: 2025-10-23T19:36:46.119153Z, end-time: 2025-10-23T19:36:46.854868Z, duration: 0, exit-code: 0 python -mvirtualenv $READTHEDOCS_VIRTUALENV_PATH created virtual environment CPython3.9.22.final.0-64 in 487ms creator CPython3Posix(dest=/home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/109, clear=False, no_vcs_ignore=False, global=False) seeder FromAppData(download=False, pip=bundle, setuptools=bundle, wheel=bundle, via=copy, app_data_dir=/home/docs/.local/share/virtualenv) added seed packages: pip==23.1, setuptools==67.6.1, wheel==0.40.0 activators BashActivator,CShellActivator,FishActivator,NushellActivator,PowerShellActivator,PythonActivator [rtd-command-info] start-time: 2025-10-23T19:36:46.937126Z, end-time: 2025-10-23T19:36:51.668491Z, duration: 4, exit-code: 0 python -m pip install --upgrade --no-cache-dir pip setuptools Looking in indexes: https://pypi.org/simple, https://packages.idmod.org/api/pypi/pypi-production/simple Requirement already satisfied: pip in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/109/lib/python3.9/site-packages (23.1) Collecting pip Downloading https://packages.idmod.org/api/pypi/pypi-production/packages/packages/b7/3f/945ef7ab14dc4f9d7f40288d2df998d1837ee0888ec3659c813487572faa/pip-25.2-py3-none-any.whl (1.8 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 1.8/1.8 MB 13.6 MB/s eta 0:00:00 Requirement already satisfied: setuptools in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-emodpy-malaria/envs/109/lib/python3.9/site-packages (67.6.1) Collecting setuptools Downloading setuptools-80.9.0-py3-none-any.whl (1.2 MB) ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 1.2/1.2 MB 41.7 MB/s eta 0:00:00 Installing collected packages: setuptools, pip Attempting uninstall: setuptools Found existing installation: setuptools 67.6.1 Uninstalling setuptools-67.6.1: Successfully uninstalled setuptools-67.6.1 Attempting uninstall: pip Found existing installation: pip 23.1 Uninstalling pip-23.1: Successfully uninstalled pip-23.1 Successfully installed pip-25.2 setuptools-80.9.0 [rtd-command-info] start-time: 2025-10-23T19:36:51.752953Z, end-time: 2025-10-23T19:36:53.391926Z, duration: 1, exit-code: 1 python -m pip install --upgrade --no-cache-dir sphinx Looking in indexes: https://pypi.org/simple, https://packages.idmod.org/api/pypi/pypi-production/simple Collecting sphinx ERROR: HTTP error 404 while getting https://packages.idmod.org/api/pypi/pypi-production/packages/packages/0d/ef/153f6803c5d5f8917dbb7f7fcf6d34a871ede3296fa89c2c703f5f8a6c8e/sphinx-7.4.7-py3-none-any.whl#sha256=c2419e2135d11f1951cd994d6eb18a1835bd8fdd8429f9ca375dc1f3281bd239 (from https://packages.idmod.org/api/pypi/pypi-production/simple/sphinx/) (requires-python:>=3.9) ERROR: Could not install requirement sphinx from https://packages.idmod.org/api/pypi/pypi-production/packages/packages/0d/ef/153f6803c5d5f8917dbb7f7fcf6d34a871ede3296fa89c2c703f5f8a6c8e/sphinx-7.4.7-py3-none-any.whl#sha256=c2419e2135d11f1951cd994d6eb18a1835bd8fdd8429f9ca375dc1f3281bd239 because of HTTP error 404 Client Error: for url: https://packages.idmod.org/api/pypi/pypi-production/packages/packages/0d/ef/153f6803c5d5f8917dbb7f7fcf6d34a871ede3296fa89c2c703f5f8a6c8e/sphinx-7.4.7-py3-none-any.whl for URL https://packages.idmod.org/api/pypi/pypi-production/packages/packages/0d/ef/153f6803c5d5f8917dbb7f7fcf6d34a871ede3296fa89c2c703f5f8a6c8e/sphinx-7.4.7-py3-none-any.whl#sha256=c2419e2135d11f1951cd994d6eb18a1835bd8fdd8429f9ca375dc1f3281bd239 (from https://packages.idmod.org/api/pypi/pypi-production/simple/sphinx/) (requires-python:>=3.9)