Read the Docs build information
Build id: 2295106
Project: institute-for-disease-modeling-vis-tools
Version: latest
Commit: c16d027a5c71637b2dc3d8c9a8399590d6f1f87a
Date: 2024-06-18T23:04:09.750846Z
State: finished
Success: True


[rtd-command-info] start-time: 2024-06-18T23:04:11.000079Z, end-time: 2024-06-18T23:04:14.287589Z, duration: 3, exit-code: 0
git clone --depth 1 https://github.com/InstituteforDiseaseModeling/vis-tools.git .
Cloning into '.'...

[rtd-command-info] start-time: 2024-06-18T23:04:14.360801Z, end-time: 2024-06-18T23:04:18.040423Z, duration: 3, exit-code: 0
git fetch origin --force --prune --prune-tags --depth 50 refs/heads/main:refs/remotes/origin/main


[rtd-command-info] start-time: 2024-06-18T23:04:18.172675Z, end-time: 2024-06-18T23:04:19.440114Z, duration: 1, exit-code: 0
git checkout --force origin/main
Note: switching to 'origin/main'.

You are in 'detached HEAD' state. You can look around, make experimental
changes and commit them, and you can discard any commits you make in this
state without impacting any branches by switching back to a branch.

If you want to create a new branch to retain commits you create, you may
do so (now or later) by using -c with the switch command. Example:

  git switch -c <new-branch-name>

Or undo this operation with:

  git switch -

Turn off this advice by setting config variable advice.detachedHead to false

HEAD is now at c16d027 Merge pull request #29 from RCarter-IDM/pydata

[rtd-command-info] start-time: 2024-06-18T23:04:19.517165Z, end-time: 2024-06-18T23:04:19.574701Z, duration: 0, exit-code: 0
cat .readthedocs.yml
# .readthedocs.yml
# Read the Docs configuration file
# See https://docs.readthedocs.io/en/stable/config-file/v2.html for details

# Required
version: 2

# Set the version of Python and other tools you might need
build:
  os: ubuntu-20.04
  tools:
    python: "3.9"

# Build documentation in the docs/ directory with Sphinx
sphinx:
  configuration: docs/conf.py
  fail_on_warning: true

# Build documentation with MkDocs
#mkdocs:
#  configuration: mkdocs.yml

# Optionally build your docs in additional formats such as PDF
formats:
  - htmlzip

# Optionally set the version of Python and requirements required to build your docs
python:
  install:
    - requirements: docs/requirements.txt
    - method: setuptools
      path: . 

# Optionally rank topics in search results, between -10 (lower) and 10 (higher).
# 0 is normal rank, not no rank

search:
  ranking:
    intro.html: 3
    install.html: 3
    vis_tools.*: 2

[rtd-command-info] start-time: 2024-06-18T23:04:25.359664Z, end-time: 2024-06-18T23:04:25.451374Z, duration: 0, exit-code: 0
asdf global python 3.9.19


[rtd-command-info] start-time: 2024-06-18T23:04:25.857598Z, end-time: 2024-06-18T23:04:27.067796Z, duration: 1, exit-code: 0
python -mvirtualenv $READTHEDOCS_VIRTUALENV_PATH
created virtual environment CPython3.9.19.final.0-64 in 840ms
  creator CPython3Posix(dest=/home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-vis-tools/envs/latest, clear=False, no_vcs_ignore=False, global=False)
  seeder FromAppData(download=False, pip=bundle, setuptools=bundle, wheel=bundle, via=copy, app_data_dir=/home/docs/.local/share/virtualenv)
    added seed packages: pip==23.1, setuptools==67.6.1, wheel==0.40.0
  activators BashActivator,CShellActivator,FishActivator,NushellActivator,PowerShellActivator,PythonActivator

[rtd-command-info] start-time: 2024-06-18T23:04:27.142655Z, end-time: 2024-06-18T23:04:37.383068Z, duration: 10, exit-code: 0
python -m pip install --upgrade --no-cache-dir pip setuptools
Looking in indexes: https://pypi.org/simple, https://packages.idmod.org/api/pypi/pypi-production/simple
Requirement already satisfied: pip in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-vis-tools/envs/latest/lib/python3.9/site-packages (23.1)
Collecting pip
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Requirement already satisfied: setuptools in /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-vis-tools/envs/latest/lib/python3.9/site-packages (67.6.1)
Collecting setuptools
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Installing collected packages: setuptools, pip
  Attempting uninstall: setuptools
    Found existing installation: setuptools 67.6.1
    Uninstalling setuptools-67.6.1:
      Successfully uninstalled setuptools-67.6.1
  Attempting uninstall: pip
    Found existing installation: pip 23.1
    Uninstalling pip-23.1:
      Successfully uninstalled pip-23.1
Successfully installed pip-24.0 setuptools-70.0.0

[rtd-command-info] start-time: 2024-06-18T23:04:37.447315Z, end-time: 2024-06-18T23:04:46.404931Z, duration: 8, exit-code: 0
python -m pip install --upgrade --no-cache-dir sphinx readthedocs-sphinx-ext
Looking in indexes: https://pypi.org/simple, https://packages.idmod.org/api/pypi/pypi-production/simple
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Collecting certifi>=2017.4.17 (from requests>=2.25.0->sphinx)
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Installing collected packages: snowballstemmer, zipp, urllib3, tomli, sphinxcontrib-serializinghtml, sphinxcontrib-qthelp, sphinxcontrib-jsmath, sphinxcontrib-htmlhelp, sphinxcontrib-devhelp, sphinxcontrib-applehelp, Pygments, packaging, MarkupSafe, imagesize, idna, docutils, charset-normalizer, certifi, babel, alabaster, requests, Jinja2, importlib-metadata, sphinx, readthedocs-sphinx-ext
Successfully installed Jinja2-3.1.4 MarkupSafe-2.1.5 Pygments-2.18.0 alabaster-0.7.16 babel-2.15.0 certifi-2024.6.2 charset-normalizer-3.3.2 docutils-0.21.2 idna-3.7 imagesize-1.4.1 importlib-metadata-7.1.0 packaging-24.1 readthedocs-sphinx-ext-2.2.5 requests-2.32.3 snowballstemmer-2.2.0 sphinx-7.3.7 sphinxcontrib-applehelp-1.0.8 sphinxcontrib-devhelp-1.0.6 sphinxcontrib-htmlhelp-2.0.5 sphinxcontrib-jsmath-1.0.1 sphinxcontrib-qthelp-1.0.7 sphinxcontrib-serializinghtml-1.1.10 tomli-2.0.1 urllib3-2.2.2 zipp-3.19.2

[rtd-command-info] start-time: 2024-06-18T23:04:46.475405Z, end-time: 2024-06-18T23:05:15.718170Z, duration: 29, exit-code: 0
python -m pip install --exists-action=w --no-cache-dir -r docs/requirements.txt
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Installing collected packages: webencodings, wcwidth, pure-eval, ptyprocess, fastjsonschema, websocket-client, webcolors, uri-template, typing-extensions, types-python-dateutil, traitlets, tornado, tinycss2, soupsieve, sniffio, six, send2trash, rpds-py, rfc3986-validator, readthedocs-sphinx-search, pyzmq, pyyaml, python-json-logger, pycparser, psutil, prompt-toolkit, prometheus-client, platformdirs, pexpect, parso, pandocfilters, overrides, nest-asyncio, mistune, mdurl, jupyterlab-pygments, jsonpointer, json5, jinja2, fqdn, executing, exceptiongroup, docutils, defusedxml, decorator, debugpy, attrs, accessible-pygments, terminado, sphinx, rfc3339-validator, referencing, python-dateutil, pockets, plantweb, matplotlib-inline, markdown-it-py, jupyter-core, jedi, comm, cffi, bleach, beautifulsoup4, async-lru, asttokens, anyio, stack-data, sphinxcontrib-programoutput, sphinxcontrib-napoleon, sphinxcontrib-jquery, pydata-sphinx-theme, numpydoc, mdit-py-plugins, jupyter-server-terminals, jupyter-client, jsonschema-specifications, arrow, argon2-cffi-bindings, myst-parser, jsonschema, isoduration, ipython, argon2-cffi, nbformat, ipykernel, nbclient, jupyter-events, nbconvert, nbsphinx, jupyter-server, notebook-shim, jupyterlab-server, jupyter-lsp, jupyterlab
  Attempting uninstall: jinja2
    Found existing installation: Jinja2 3.1.4
    Uninstalling Jinja2-3.1.4:
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  Attempting uninstall: docutils
    Found existing installation: docutils 0.21.2
    Uninstalling docutils-0.21.2:
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  Attempting uninstall: sphinx
    Found existing installation: Sphinx 7.3.7
    Uninstalling Sphinx-7.3.7:
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Successfully installed accessible-pygments-0.0.5 anyio-4.4.0 argon2-cffi-23.1.0 argon2-cffi-bindings-21.2.0 arrow-1.3.0 asttokens-2.4.1 async-lru-2.0.4 attrs-23.2.0 beautifulsoup4-4.12.3 bleach-6.1.0 cffi-1.16.0 comm-0.2.2 debugpy-1.8.1 decorator-5.1.1 defusedxml-0.7.1 docutils-0.19 exceptiongroup-1.2.1 executing-2.0.1 fastjsonschema-2.20.0 fqdn-1.5.1 ipykernel-6.29.4 ipython-8.18.1 isoduration-20.11.0 jedi-0.19.1 jinja2-3.0.3 json5-0.9.25 jsonpointer-3.0.0 jsonschema-4.22.0 jsonschema-specifications-2023.12.1 jupyter-client-8.6.2 jupyter-core-5.7.2 jupyter-events-0.10.0 jupyter-lsp-2.2.5 jupyter-server-2.14.1 jupyter-server-terminals-0.5.3 jupyterlab-4.0.13 jupyterlab-pygments-0.3.0 jupyterlab-server-2.27.2 markdown-it-py-3.0.0 matplotlib-inline-0.1.7 mdit-py-plugins-0.4.1 mdurl-0.1.2 mistune-3.0.2 myst-parser-2.0.0 nbclient-0.10.0 nbconvert-7.16.4 nbformat-5.10.4 nbsphinx-0.9.4 nest-asyncio-1.6.0 notebook-shim-0.2.4 numpydoc-1.5.0 overrides-7.7.0 pandocfilters-1.5.1 parso-0.8.4 pexpect-4.9.0 plantweb-1.2.1 platformdirs-4.2.2 pockets-0.9.1 prometheus-client-0.20.0 prompt-toolkit-3.0.47 psutil-6.0.0 ptyprocess-0.7.0 pure-eval-0.2.2 pycparser-2.22 pydata-sphinx-theme-0.15.3 python-dateutil-2.9.0.post0 python-json-logger-2.0.7 pyyaml-6.0.1 pyzmq-26.0.3 readthedocs-sphinx-search-0.3.2 referencing-0.35.1 rfc3339-validator-0.1.4 rfc3986-validator-0.1.1 rpds-py-0.18.1 send2trash-1.8.3 six-1.16.0 sniffio-1.3.1 soupsieve-2.5 sphinx-6.2.1 sphinxcontrib-jquery-4.1 sphinxcontrib-napoleon-0.7 sphinxcontrib-programoutput-0.17 stack-data-0.6.3 terminado-0.18.1 tinycss2-1.3.0 tornado-6.4.1 traitlets-5.14.3 types-python-dateutil-2.9.0.20240316 typing-extensions-4.12.2 uri-template-1.3.0 wcwidth-0.2.13 webcolors-24.6.0 webencodings-0.5.1 websocket-client-1.8.0

[rtd-command-info] start-time: 2024-06-18T23:05:15.843111Z, end-time: 2024-06-18T23:05:17.630019Z, duration: 1, exit-code: 0
python ./setup.py install --force
running install
/home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-vis-tools/envs/latest/lib/python3.9/site-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated.
!!

        ********************************************************************************
        Please avoid running ``setup.py`` directly.
        Instead, use pypa/build, pypa/installer or other
        standards-based tools.

        See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
        ********************************************************************************

!!
  self.initialize_options()
/home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-vis-tools/envs/latest/lib/python3.9/site-packages/setuptools/_distutils/cmd.py:66: EasyInstallDeprecationWarning: easy_install command is deprecated.
!!

        ********************************************************************************
        Please avoid running ``setup.py`` and ``easy_install``.
        Instead, use pypa/build, pypa/installer or other
        standards-based tools.

        See https://github.com/pypa/setuptools/issues/917 for details.
        ********************************************************************************

!!
  self.initialize_options()
running bdist_egg
running egg_info
creating vis_tools.egg-info
writing vis_tools.egg-info/PKG-INFO
writing dependency_links to vis_tools.egg-info/dependency_links.txt
writing entry points to vis_tools.egg-info/entry_points.txt
writing requirements to vis_tools.egg-info/requires.txt
writing top-level names to vis_tools.egg-info/top_level.txt
writing manifest file 'vis_tools.egg-info/SOURCES.txt'
reading manifest file 'vis_tools.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
adding license file 'LICENSE.txt'
writing manifest file 'vis_tools.egg-info/SOURCES.txt'
installing library code to build/bdist.linux-x86_64/egg
running install_lib
running build_py
creating build
creating build/lib
creating build/lib/vis_tools
copying vis_tools/Survey.py -> build/lib/vis_tools
copying vis_tools/CZMLWriter.py -> build/lib/vis_tools
copying vis_tools/MigrationHelpers.py -> build/lib/vis_tools
copying vis_tools/Demographics.py -> build/lib/vis_tools
copying vis_tools/Config.py -> build/lib/vis_tools
copying vis_tools/Color.py -> build/lib/vis_tools
copying vis_tools/SpatialReports.py -> build/lib/vis_tools
copying vis_tools/__init__.py -> build/lib/vis_tools
copying vis_tools/NamedColors.py -> build/lib/vis_tools
copying vis_tools/VisSet.py -> build/lib/vis_tools
copying vis_tools/CSVReport.py -> build/lib/vis_tools
copying vis_tools/SpatialBinaryHeader.py -> build/lib/vis_tools
copying vis_tools/Gradient.py -> build/lib/vis_tools
copying vis_tools/SpatialBinary.py -> build/lib/vis_tools
copying vis_tools/defaultvisset.json -> build/lib/vis_tools
creating build/bdist.linux-x86_64
creating build/bdist.linux-x86_64/egg
creating build/bdist.linux-x86_64/egg/vis_tools
copying build/lib/vis_tools/Survey.py -> build/bdist.linux-x86_64/egg/vis_tools
copying build/lib/vis_tools/CZMLWriter.py -> build/bdist.linux-x86_64/egg/vis_tools
copying build/lib/vis_tools/MigrationHelpers.py -> build/bdist.linux-x86_64/egg/vis_tools
copying build/lib/vis_tools/Demographics.py -> build/bdist.linux-x86_64/egg/vis_tools
copying build/lib/vis_tools/Config.py -> build/bdist.linux-x86_64/egg/vis_tools
copying build/lib/vis_tools/Color.py -> build/bdist.linux-x86_64/egg/vis_tools
copying build/lib/vis_tools/SpatialReports.py -> build/bdist.linux-x86_64/egg/vis_tools
copying build/lib/vis_tools/__init__.py -> build/bdist.linux-x86_64/egg/vis_tools
copying build/lib/vis_tools/NamedColors.py -> build/bdist.linux-x86_64/egg/vis_tools
copying build/lib/vis_tools/VisSet.py -> build/bdist.linux-x86_64/egg/vis_tools
copying build/lib/vis_tools/CSVReport.py -> build/bdist.linux-x86_64/egg/vis_tools
copying build/lib/vis_tools/SpatialBinaryHeader.py -> build/bdist.linux-x86_64/egg/vis_tools
copying build/lib/vis_tools/Gradient.py -> build/bdist.linux-x86_64/egg/vis_tools
copying build/lib/vis_tools/defaultvisset.json -> build/bdist.linux-x86_64/egg/vis_tools
copying build/lib/vis_tools/SpatialBinary.py -> build/bdist.linux-x86_64/egg/vis_tools
byte-compiling build/bdist.linux-x86_64/egg/vis_tools/Survey.py to Survey.cpython-39.pyc
build/bdist.linux-x86_64/egg/vis_tools/Survey.py:364: SyntaxWarning: "is not" with a literal. Did you mean "!="?
  if key not in known_fields and type(node_attrs[key]) is not "dict":
byte-compiling build/bdist.linux-x86_64/egg/vis_tools/CZMLWriter.py to CZMLWriter.cpython-39.pyc
build/bdist.linux-x86_64/egg/vis_tools/CZMLWriter.py:711: SyntaxWarning: "is" with a literal. Did you mean "=="?
  if placement is "Top": return "BOTTOM"
build/bdist.linux-x86_64/egg/vis_tools/CZMLWriter.py:712: SyntaxWarning: "is" with a literal. Did you mean "=="?
  if placement is "Bottom": return "TOP"
build/bdist.linux-x86_64/egg/vis_tools/CZMLWriter.py:718: SyntaxWarning: "is" with a literal. Did you mean "=="?
  if placement is "Left": return "RIGHT"
build/bdist.linux-x86_64/egg/vis_tools/CZMLWriter.py:719: SyntaxWarning: "is" with a literal. Did you mean "=="?
  if placement is "Right": return "LEFT"
byte-compiling build/bdist.linux-x86_64/egg/vis_tools/MigrationHelpers.py to MigrationHelpers.cpython-39.pyc
byte-compiling build/bdist.linux-x86_64/egg/vis_tools/Demographics.py to Demographics.cpython-39.pyc
byte-compiling build/bdist.linux-x86_64/egg/vis_tools/Config.py to Config.cpython-39.pyc
byte-compiling build/bdist.linux-x86_64/egg/vis_tools/Color.py to Color.cpython-39.pyc
byte-compiling build/bdist.linux-x86_64/egg/vis_tools/SpatialReports.py to SpatialReports.cpython-39.pyc
byte-compiling build/bdist.linux-x86_64/egg/vis_tools/__init__.py to __init__.cpython-39.pyc
byte-compiling build/bdist.linux-x86_64/egg/vis_tools/NamedColors.py to NamedColors.cpython-39.pyc
byte-compiling build/bdist.linux-x86_64/egg/vis_tools/VisSet.py to VisSet.cpython-39.pyc
build/bdist.linux-x86_64/egg/vis_tools/VisSet.py:774: SyntaxWarning: "is" with a literal. Did you mean "=="?
  if self.timestepCount is 0:
build/bdist.linux-x86_64/egg/vis_tools/VisSet.py:861: SyntaxWarning: "is" with a literal. Did you mean "=="?
  if self.timestepCount is 0:
build/bdist.linux-x86_64/egg/vis_tools/VisSet.py:965: SyntaxWarning: "is" with a literal. Did you mean "=="?
  if self.timestepCount is 0:
build/bdist.linux-x86_64/egg/vis_tools/VisSet.py:1048: SyntaxWarning: "is" with a literal. Did you mean "=="?
  if self.timestepCount is 0:
byte-compiling build/bdist.linux-x86_64/egg/vis_tools/CSVReport.py to CSVReport.cpython-39.pyc
byte-compiling build/bdist.linux-x86_64/egg/vis_tools/SpatialBinaryHeader.py to SpatialBinaryHeader.cpython-39.pyc
byte-compiling build/bdist.linux-x86_64/egg/vis_tools/Gradient.py to Gradient.cpython-39.pyc
byte-compiling build/bdist.linux-x86_64/egg/vis_tools/SpatialBinary.py to SpatialBinary.cpython-39.pyc
creating build/bdist.linux-x86_64/egg/EGG-INFO
copying vis_tools.egg-info/PKG-INFO -> build/bdist.linux-x86_64/egg/EGG-INFO
copying vis_tools.egg-info/SOURCES.txt -> build/bdist.linux-x86_64/egg/EGG-INFO
copying vis_tools.egg-info/dependency_links.txt -> build/bdist.linux-x86_64/egg/EGG-INFO
copying vis_tools.egg-info/entry_points.txt -> build/bdist.linux-x86_64/egg/EGG-INFO
copying vis_tools.egg-info/not-zip-safe -> build/bdist.linux-x86_64/egg/EGG-INFO
copying vis_tools.egg-info/requires.txt -> build/bdist.linux-x86_64/egg/EGG-INFO
copying vis_tools.egg-info/top_level.txt -> build/bdist.linux-x86_64/egg/EGG-INFO
creating dist
creating 'dist/vis_tools-1.4-py3.9.egg' and adding 'build/bdist.linux-x86_64/egg' to it
removing 'build/bdist.linux-x86_64/egg' (and everything under it)
Processing vis_tools-1.4-py3.9.egg
creating /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-vis-tools/envs/latest/lib/python3.9/site-packages/vis_tools-1.4-py3.9.egg
Extracting vis_tools-1.4-py3.9.egg to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-vis-tools/envs/latest/lib/python3.9/site-packages
/home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-vis-tools/envs/latest/lib/python3.9/site-packages/vis_tools-1.4-py3.9.egg/vis_tools/CZMLWriter.py:711: SyntaxWarning: "is" with a literal. Did you mean "=="?
  if placement is "Top": return "BOTTOM"
/home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-vis-tools/envs/latest/lib/python3.9/site-packages/vis_tools-1.4-py3.9.egg/vis_tools/CZMLWriter.py:712: SyntaxWarning: "is" with a literal. Did you mean "=="?
  if placement is "Bottom": return "TOP"
/home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-vis-tools/envs/latest/lib/python3.9/site-packages/vis_tools-1.4-py3.9.egg/vis_tools/CZMLWriter.py:718: SyntaxWarning: "is" with a literal. Did you mean "=="?
  if placement is "Left": return "RIGHT"
/home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-vis-tools/envs/latest/lib/python3.9/site-packages/vis_tools-1.4-py3.9.egg/vis_tools/CZMLWriter.py:719: SyntaxWarning: "is" with a literal. Did you mean "=="?
  if placement is "Right": return "LEFT"
/home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-vis-tools/envs/latest/lib/python3.9/site-packages/vis_tools-1.4-py3.9.egg/vis_tools/Survey.py:364: SyntaxWarning: "is not" with a literal. Did you mean "!="?
  if key not in known_fields and type(node_attrs[key]) is not "dict":
/home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-vis-tools/envs/latest/lib/python3.9/site-packages/vis_tools-1.4-py3.9.egg/vis_tools/VisSet.py:774: SyntaxWarning: "is" with a literal. Did you mean "=="?
  if self.timestepCount is 0:
/home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-vis-tools/envs/latest/lib/python3.9/site-packages/vis_tools-1.4-py3.9.egg/vis_tools/VisSet.py:861: SyntaxWarning: "is" with a literal. Did you mean "=="?
  if self.timestepCount is 0:
/home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-vis-tools/envs/latest/lib/python3.9/site-packages/vis_tools-1.4-py3.9.egg/vis_tools/VisSet.py:965: SyntaxWarning: "is" with a literal. Did you mean "=="?
  if self.timestepCount is 0:
/home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-vis-tools/envs/latest/lib/python3.9/site-packages/vis_tools-1.4-py3.9.egg/vis_tools/VisSet.py:1048: SyntaxWarning: "is" with a literal. Did you mean "=="?
  if self.timestepCount is 0:
Adding vis-tools 1.4 to easy-install.pth file
Installing survey script to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-vis-tools/envs/latest/bin

Installed /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-vis-tools/envs/latest/lib/python3.9/site-packages/vis_tools-1.4-py3.9.egg
Processing dependencies for vis-tools==1.4
Searching for czml==0.3.3
Reading https://pypi.org/simple/czml/
Downloading https://files.pythonhosted.org/packages/d9/86/910f69a4b9dd4421c4ce0b9ee1f95380b88517202b63ba201af74f227515/czml-0.3.3.tar.gz#sha256=ed14e24852082c71a19ec8e8ebe35cf838ab54df4886d4f68294f609b126347a
Best match: czml 0.3.3
Processing czml-0.3.3.tar.gz
Writing /tmp/easy_install-742tuve7/czml-0.3.3/setup.cfg
Running czml-0.3.3/setup.py -q bdist_egg --dist-dir /tmp/easy_install-742tuve7/czml-0.3.3/egg-dist-tmp-z2_sk5ss
warning: no previously-included files matching '*.pyo' found under directory '*.pyc'
warning: no previously-included files found matching 'czml/.*'
/home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-vis-tools/envs/latest/lib/python3.9/site-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated.
!!

        ********************************************************************************
        Please avoid running ``setup.py`` directly.
        Instead, use pypa/build, pypa/installer or other
        standards-based tools.

        See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
        ********************************************************************************

!!
  self.initialize_options()
Adding czml 0.3.3 to easy-install.pth file
detected new path './vis_tools-1.4-py3.9.egg'

Installed /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-vis-tools/envs/latest/lib/python3.9/site-packages/czml-0.3.3-py3.9.egg
Searching for pytz
Reading https://pypi.org/simple/pytz/
Downloading https://files.pythonhosted.org/packages/9c/3d/a121f284241f08268b21359bd425f7d4825cffc5ac5cd0e1b3d82ffd2b10/pytz-2024.1-py2.py3-none-any.whl#sha256=328171f4e3623139da4983451950b28e95ac706e13f3f2630a879749e7a8b319
Best match: pytz 2024.1
Processing pytz-2024.1-py2.py3-none-any.whl
Installing pytz-2024.1-py2.py3-none-any.whl to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-vis-tools/envs/latest/lib/python3.9/site-packages
Adding pytz 2024.1 to easy-install.pth file
detected new path './czml-0.3.3-py3.9.egg'

Installed /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-vis-tools/envs/latest/lib/python3.9/site-packages/pytz-2024.1-py3.9.egg
Searching for pygeoif
Reading https://pypi.org/simple/pygeoif/
Downloading https://files.pythonhosted.org/packages/2b/af/a173f5db8a431a23b4f8f52000964f94b6d649a79ae9185762601b958650/pygeoif-1.5.0-py3-none-any.whl#sha256=d8b4e08f1ce5228286cb92a1c4f8418482d578a9c17eff15dac2af08b65900ee
Best match: pygeoif 1.5.0
Processing pygeoif-1.5.0-py3-none-any.whl
Installing pygeoif-1.5.0-py3-none-any.whl to /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-vis-tools/envs/latest/lib/python3.9/site-packages
Adding pygeoif 1.5.0 to easy-install.pth file
detected new path './pytz-2024.1-py3.9.egg'

Installed /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-vis-tools/envs/latest/lib/python3.9/site-packages/pygeoif-1.5.0-py3.9.egg
Searching for python-dateutil==2.9.0.post0
Best match: python-dateutil 2.9.0.post0
Adding python-dateutil 2.9.0.post0 to easy-install.pth file
detected new path './pygeoif-1.5.0-py3.9.egg'

Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-vis-tools/envs/latest/lib/python3.9/site-packages
Searching for six==1.16.0
Best match: six 1.16.0
Adding six 1.16.0 to easy-install.pth file

Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-vis-tools/envs/latest/lib/python3.9/site-packages
Searching for typing-extensions==4.12.2
Best match: typing-extensions 4.12.2
Adding typing-extensions 4.12.2 to easy-install.pth file

Using /home/docs/checkouts/readthedocs.org/user_builds/institute-for-disease-modeling-vis-tools/envs/latest/lib/python3.9/site-packages
Finished processing dependencies for vis-tools==1.4

[rtd-command-info] start-time: 2024-06-18T23:05:18.177700Z, end-time: 2024-06-18T23:05:18.239952Z, duration: 0, exit-code: 0
cat docs/conf.py
# -*- coding: utf-8 -*-
#
# Sphinx Demo documentation build configuration file, created by
# sphinx-quickstart on Fri Aug 26 16:52:16 2016.
#
# This file is execfile()d with the current directory set to its
# containing dir.
#
# Note that not all possible configuration values are present in this
# autogenerated file.
#
# All configuration values have a default; values that are commented out
# serve to show the default.

# If extensions (or modules to document with autodoc) are in another directory,
# add these directories to sys.path here. If the directory is relative to the
# documentation root, use os.path.abspath to make it absolute, like shown here.
#
import os
import subprocess
import sys
#import sphinx_rtd_theme
from datetime import datetime

if sys.platform in ["linux", "darwin"]:
    subprocess.check_output(["make", "generate-api"], cwd=os.path.dirname(os.path.abspath(__file__)))
else:
    subprocess.check_output(["make.bat", "generate-api"], cwd=os.path.dirname(os.path.abspath(__file__)))

# -- General configuration ------------------------------------------------

# If your documentation needs a minimal Sphinx version, state it here.
#
# needs_sphinx = '1.0'

# Add any Sphinx extension module names here, as strings. They can be
# extensions coming with Sphinx (named 'sphinx.ext.*') or your custom
# ones.
extensions = [
    'sphinx.ext.mathjax',
    'sphinx.ext.githubpages',
    'sphinx.ext.autodoc',
    'sphinx.ext.napoleon',
    'sphinx.ext.todo',
    'plantweb.directive',
    'sphinx_search.extension', # search across multiple docsets in domain
    'sphinx.ext.viewcode', # link to view source code
    'myst_parser', # source files written in MD or RST
    'sphinxcontrib.jquery',
]

myst_enable_extensions = [
    "amsmath",
    "attrs_inline",
    "colon_fence",
    "deflist",
    "dollarmath",
    "fieldlist",
    "html_admonition",
    "html_image",
    "linkify",
    "replacements",
    "smartquotes",
    "strikethrough",
    "substitution",
    "tasklist"
]

plantuml = 'plantweb'

autodoc_default_options = {
    'member-order': 'bysource',
    'members': None
}

autodoc_mock_imports = ['pygeoif.geometry']


napoleon_google_docstring = True

# Add any paths that contain templates here, relative to this directory.
templates_path = ['_templates']

# The suffix(es) of source filenames.
# You can specify multiple suffix as a list of string:
#
source_suffix = ['.rst', '.md']

# The encoding of source files.
#
# source_encoding = 'utf-8-sig'

# The master toctree document.
master_doc = 'index'

# General information about the project.
project = u'Vis-Tools'
copyright = f'1999 - {datetime.today().year}, Bill & Melinda Gates Foundation. All rights reserved.'
author = u'Institute for Disease Modeling'

# The version info for the project you're documenting, acts as replacement for
# |version| and |release|, also used in various other places throughout the
# built documents.
#
# The short X.Y version.
version = u'1.4'
# The full version, including alpha/beta/rc tags.
# release = u'1.0'

# The language for content autogenerated by Sphinx. Refer to documentation
# for a list of supported languages.
#
# This is also used if you do content translation via gettext catalogs.
# Usually you set "language" from the command line for these cases.
language = 'en'

# There are two options for replacing |today|: either, you set today to some
# non-false value, then it is used:
#
# today = ''
#
# Else, today_fmt is used as the format for a strftime call.
#
# today_fmt = '%B %d, %Y'

# List of patterns, relative to source directory, that match files and
# directories to ignore when looking for source files.
# This patterns also effect to html_static_path and html_extra_path
exclude_patterns = ['_build', 'Thumbs.db', '.DS_Store']

# The reST default role (used for this markup: `text`) to use for all
# documents.
#
# default_role = None

# If true, '()' will be appended to :func: etc. cross-reference text.
#
# add_function_parentheses = True

# If true, the current module name will be prepended to all description
# unit titles (such as .. function::).
#
# add_module_names = True

# If true, sectionauthor and moduleauthor directives will be shown in the
# output. They are ignored by default.
#
# show_authors = False

# The name of the Pygments (syntax highlighting) style to use.
pygments_style = 'sphinx'

# A list of ignored prefixes for module index sorting.
# modindex_common_prefix = []

# If true, keep warnings as "system message" paragraphs in the built documents.
# keep_warnings = False

# If true, `todo` and `todoList` produce output, else they produce nothing.
todo_include_todos = False

# RST epilog is added to the end of every topic. Useful for replace
# directives to use across the docset.

rst_epilog = "\n.. include:: /variables.txt"

# -- Options for HTML output ----------------------------------------------

# The theme to use for HTML and HTML Help pages.  See the documentation for
# a list of builtin themes.
#
html_theme = 'pydata_sphinx_theme'

# Theme options are theme-specific and customize the look and feel of a theme
# further.  For a list of options available for each theme, see the
# documentation.
# #
html_theme_options = {
    "collapse_navigation": False,
    "navigation_depth": 3,
    "show_prev_next": True,
    "icon_links": [
        {"name": "IDM docs", "url": "https://docs.idmod.org", "icon": "fas fa-home"},
        {
            "name": "GitHub",
            "url": "https://github.com/institutefordiseasemodeling/vis-tools",
            "icon": "fab fa-github-square",
        },
    ],
    "navbar_end": ["theme-switcher", "navbar-icon-links"],
    "secondary_sidebar_items": ["navbar-side"],
    "header_links_before_dropdown": 5,
    "footer_start": ["copyright", "footer_start"],
    "footer_end": ["theme-version", "footer_end"],
}
html_sidebars = {
    "**": ["sidebar-nav-bs", "page-toc"],
}
html_logo = "images/idm-logo-transparent.png"
html_favicon = "images/favicon.ico"
html_static_path = ['_static']
html_baseurl = "https://docs.idmod.org/projects/vis-tools/en/latest"
html_context = {
    'rtd_url': 'https://docs.idmod.org/projects/vis-tools/en/latest',
    "versions_dropdown": {
        "latest": "devel (latest)",
        "stable": "current (stable)",
    },
    "default_mode": "light",
}

# Add customizations
def setup(app):
    app.add_css_file("theme_overrides.css")

# Add any paths that contain custom themes here, relative to this directory.
#html_theme_path = [sphinx_rtd_theme.get_html_theme_path()]

# The name for this set of Sphinx documents.
# "<project> v<release> documentation" by default.
#
# html_title = u'Sphinx Demo v1.0'

# A shorter title for the navigation bar.  Default is the same as html_title.
#
# html_short_title = None

# The name of an image file (relative to this directory) to place at the top
# of the sidebar.
#
#html_logo = "images/IDM_white.png"

# The name of an image file (relative to this directory) to use as a favicon of
# the docs.  This file should be a Windows icon file (.ico) being 16x16 or 32x32
# pixels large.
#
html_favicon = "images/favicon.ico"

# Add any paths that contain custom static files (such as style sheets) here,
# relative to this directory. They are copied after the builtin static files,
# so a file named "default.css" will overwrite the builtin "default.css".

html_static_path = ['_static']

html_css_files = ['theme_overrides.css']

#html_js_files = ['show_block_by_os.js']

# Add any extra paths that contain custom files (such as robots.txt or
# .htaccess) here, relative to this directory. These files are copied
# directly to the root of the documentation.
#
# html_extra_path = []

# If not None, a 'Last updated on:' timestamp is inserted at every page
# bottom, using the given strftime format.
# The empty string is equivalent to '%b %d, %Y'.
#
# html_last_updated_fmt = None

# If true, SmartyPants will be used to convert quotes and dashes to
# typographically correct entities.
#
# html_use_smartypants = True

# Custom sidebar templates, maps document names to template names.
#
# html_sidebars = {}

# Additional templates that should be rendered to pages, maps page names to
# template names.
#
# html_additional_pages = {}

# If false, no module index is generated.
#
# html_domain_indices = True

# If false, no index is generated.
#
# html_use_index = True

# If true, the index is split into individual pages for each letter.
#
# html_split_index = False

# If true, links to the reST sources are added to the pages.
#
html_show_sourcelink = False

# If true, "Created using Sphinx" is shown in the HTML footer. Default is True.
#
html_show_sphinx = False

# If true, "(C) Copyright ..." is shown in the HTML footer. Default is True.
#
# html_show_copyright = True

# If true, an OpenSearch description file will be output, and all pages will
# contain a <link> tag referring to it.  The value of this option must be the
# base URL from which the finished HTML is served.

# -- RTD Sphinx search for searching across the entire domain -------------

if os.environ.get('READTHEDOCS') == 'True':

    search_project_parent = "institute-for-disease-modeling-idm"
    search_project = os.environ["READTHEDOCS_PROJECT"]
    search_version = os.environ["READTHEDOCS_VERSION"]

    rtd_sphinx_search_default_filter = f"subprojects:{search_project}/{search_version}"

    rtd_sphinx_search_filters = {
        "Search this project": f"project:{search_project}/{search_version}",
        "Search all IDM docs": f"subprojects:{search_project_parent}/{search_version}",
    }

#html_use_opensearch = ''

# This is the file name suffix for HTML files (e.g. ".xhtml").
# html_file_suffix = None

# Language to be used for generating the HTML full-text search index.
# Sphinx supports the following languages:
#   'da', 'de', 'en', 'es', 'fi', 'fr', 'hu', 'it', 'ja'
#   'nl', 'no', 'pt', 'ro', 'ru', 'sv', 'tr', 'zh'
#
# html_search_language = 'en'

# A dictionary with options for the search language support, empty by default.
# 'ja' uses this config value.
# 'zh' user can custom change `jieba` dictionary path.
#
# html_search_options = {'type': 'default'}

# The name of a javascript file (relative to the configuration directory) that
# implements a search results scorer. If empty, the default will be used.
#
# html_search_scorer = 'scorer.js'

# Output file base name for HTML help builder.
htmlhelp_basename = 'Vis-Tools'

# -- RTD Sphinx search for searching across the entire domain, default parent -------------

if os.environ.get('READTHEDOCS') == 'True':

    search_project_parent = "institute-for-disease-modeling-idm"
    search_project = os.environ["READTHEDOCS_PROJECT"]
    search_version = os.environ["READTHEDOCS_VERSION"]

    rtd_sphinx_search_default_filter = f"subprojects:{search_project_parent}/{search_version}"

    rtd_sphinx_search_filters = {
        "Search this project": f"project:{search_project}/{search_version}",
        "Search all IDM docs": f"subprojects:{search_project_parent}/{search_version}",
    }


# -- Options for LaTeX output ---------------------------------------------

latex_elements = {
     # The paper size ('letterpaper' or 'a4paper').
     #
     # 'papersize': 'letterpaper',

     # The font size ('10pt', '11pt' or '12pt').
     #
     # 'pointsize': '10pt',

     # Additional stuff for the LaTeX preamble.
     #
     # 'preamble': '',

     # Latex figure (float) alignment
     #
     # 'figure_align': 'htbp',
}

# Grouping the document tree into LaTeX files. List of tuples
# (source start file, target name, title,
#  author, documentclass [howto, manual, or own class]).
latex_documents = [
    (master_doc, 'vis-tools-docs.tex', u'Vis-Tools',
     u'Institute for Disease Modeling', 'manual'),
]

# The name of an image file (relative to this directory) to place at the top of
# the title page.
#
# latex_logo = None

# For "manual" documents, if this is true, then toplevel headings are parts,
# not chapters.
#
# latex_use_parts = False

# If true, show page references after internal links.
#
# latex_show_pagerefs = False

# If true, show URL addresses after external links.
#
# latex_show_urls = False

# Documents to append as an appendix to all manuals.
#
# latex_appendices = []

# It false, will not define \strong, \code,     itleref, \crossref ... but only
# \sphinxstrong, ..., \sphinxtitleref, ... To help avoid clash with user added
# packages.
#
# latex_keep_old_macro_names = True

# If false, no module index is generated.
#
# latex_domain_indices = True


# -- Options for manual page output ---------------------------------------

# One entry per manual page. List of tuples
# (source start file, name, description, authors, manual section).
man_pages = [
    (master_doc, 'vis-tools-docs', u'Vis-Tools',
     [author], 1)
]

# If true, show URL addresses after external links.
#
man_show_urls = True


# -- Options for Texinfo output -------------------------------------------

# Grouping the document tree into Texinfo files. List of tuples
# (source start file, target name, title, author,
#  dir menu entry, description, category)
texinfo_documents = [
    (master_doc, 'vis-tools-docs', u'Vis-Tools',
     author, 'Institute for Disease Modeling', 'How to use the IDM Vis-Tools toolkit.',
     'Miscellaneous'),
]

# Documents to append as an appendix to all manuals.
#
# texinfo_appendices = []

# If false, no module index is generated.
#
# texinfo_domain_indices = True

# How to display URL addresses: 'footnote', 'no', or 'inline'.
#
# texinfo_show_urls = 'footnote'

# If true, do not generate a @detailmenu in the "Top" node's menu.
#
# texinfo_no_detailmenu = False


# Example configuration for intersphinx: refer to the Python standard library.
# intersphinx_mapping = {'https://docs.python.org/': None}




###########################################################################
#          auto-created readthedocs.org specific configuration            #
###########################################################################


#
# The following code was added during an automated build on readthedocs.org
# It is auto created and injected for every build. The result is based on the
# conf.py.tmpl file found in the readthedocs.org codebase:
# https://github.com/rtfd/readthedocs.org/blob/main/readthedocs/doc_builder/templates/doc_builder/conf.py.tmpl
#
# Note: this file shouldn't rely on extra dependencies.

import importlib
import sys
import os.path

# Borrowed from six.
PY3 = sys.version_info[0] == 3
string_types = str if PY3 else basestring

from sphinx import version_info

# Get suffix for proper linking to GitHub
# This is deprecated in Sphinx 1.3+,
# as each page can have its own suffix
if globals().get('source_suffix', False):
    if isinstance(source_suffix, string_types):
        SUFFIX = source_suffix
    elif isinstance(source_suffix, (list, tuple)):
        # Sphinx >= 1.3 supports list/tuple to define multiple suffixes
        SUFFIX = source_suffix[0]
    elif isinstance(source_suffix, dict):
        # Sphinx >= 1.8 supports a mapping dictionary for multiple suffixes
        SUFFIX = list(source_suffix.keys())[0]  # make a ``list()`` for py2/py3 compatibility
    else:
        # default to .rst
        SUFFIX = '.rst'
else:
    SUFFIX = '.rst'

# Add RTD Static Path. Add to the end because it overwrites previous files.
if not 'html_static_path' in globals():
    html_static_path = []
if os.path.exists('_static'):
    html_static_path.append('_static')

# Define this variable in case it's not defined by the user.
# It defaults to `alabaster` which is the default from Sphinx.
# https://www.sphinx-doc.org/en/master/usage/configuration.html#confval-html_theme
html_theme = globals().get('html_theme', 'alabaster')

#Add project information to the template context.
context = {
    'html_theme': html_theme,
    'current_version': "latest",
    'version_slug': "latest",
    'MEDIA_URL': "https://media.readthedocs.com/media/",
    'STATIC_URL': "https://assets.readthedocs.com/",
    'PRODUCTION_DOMAIN': "readthedocs.com",
    'proxied_static_path': "/_/static/",
    'versions': [
    ("latest", "/en/latest/"),
    ],
    'downloads': [ 
    ("html", "//docs.idmod.org/_/downloads/vis-tools/en/latest/htmlzip/"),
    ],
    'subprojects': [ 
    ],
    'slug': 'institute-for-disease-modeling-vis-tools',
    'name': u'vis-tools',
    'rtd_language': u'en',
    'programming_language': u'py',
    'canonical_url': '',
    'analytics_code': 'None',
    'single_version': False,
    'conf_py_path': '/docs/',
    'api_host': 'https://readthedocs.com',
    'github_user': 'InstituteforDiseaseModeling',
    'proxied_api_host': '/_',
    'github_repo': 'vis-tools',
    'github_version': 'main',
    'display_github': True,
    'bitbucket_user': 'None',
    'bitbucket_repo': 'None',
    'bitbucket_version': 'main',
    'display_bitbucket': False,
    'gitlab_user': 'None',
    'gitlab_repo': 'None',
    'gitlab_version': 'main',
    'display_gitlab': False,
    'READTHEDOCS': True,
    'using_theme': (html_theme == "default"),
    'new_theme': (html_theme == "sphinx_rtd_theme"),
    'source_suffix': SUFFIX,
    'ad_free': False,
    'docsearch_disabled': False,
    'user_analytics_code': '',
    'global_analytics_code': 'UA-17997319-2',
    'commit': 'c16d027a',
}

# For sphinx >=1.8 we can use html_baseurl to set the canonical URL.
# https://www.sphinx-doc.org/en/master/usage/configuration.html#confval-html_baseurl
if version_info >= (1, 8):
    if not globals().get('html_baseurl'):
        html_baseurl = context['canonical_url']
    context['canonical_url'] = None





if 'html_context' in globals():
    for key in context:
        if key not in html_context:
            html_context[key] = context[key]
else:
    html_context = context

# Add custom RTD extension
if 'extensions' in globals():
    # Insert at the beginning because it can interfere
    # with other extensions.
    # See https://github.com/rtfd/readthedocs.org/pull/4054
    extensions.insert(0, "readthedocs_ext.readthedocs")
else:
    extensions = ["readthedocs_ext.readthedocs"]

# Add External version warning banner to the external version documentation
if 'branch' == 'external':
    extensions.insert(1, "readthedocs_ext.external_version_warning")
    readthedocs_vcs_url = 'None'
    readthedocs_build_url = 'https://readthedocs.com/projects/institute-for-disease-modeling-vis-tools/builds/2295106/'

project_language = 'en'

# User's Sphinx configurations
language_user = globals().get('language', None)
latex_engine_user = globals().get('latex_engine', None)
latex_elements_user = globals().get('latex_elements', None)

# Remove this once xindy gets installed in Docker image and XINDYOPS
# env variable is supported
# https://github.com/rtfd/readthedocs-docker-images/pull/98
latex_use_xindy = False

chinese = any([
    language_user in ('zh_CN', 'zh_TW'),
    project_language in ('zh_CN', 'zh_TW'),
])

japanese = any([
    language_user == 'ja',
    project_language == 'ja',
])

if chinese:
    latex_engine = latex_engine_user or 'xelatex'

    latex_elements_rtd = {
        'preamble': '\\usepackage[UTF8]{ctex}\n',
    }
    latex_elements = latex_elements_user or latex_elements_rtd
elif japanese:
    latex_engine = latex_engine_user or 'platex'

# Make sure our build directory is always excluded
exclude_patterns = globals().get('exclude_patterns', [])
exclude_patterns.extend(['_build'])

[rtd-command-info] start-time: 2024-06-18T23:05:18.312593Z, end-time: 2024-06-18T23:05:29.818876Z, duration: 11, exit-code: 0
python -m sphinx -T -W --keep-going -b html -d _build/doctrees -D language=en . $READTHEDOCS_OUTPUT/html
Running Sphinx v6.2.1
rm: cannot remove 'modules.rst': No such file or directory
rm: cannot remove 'vis_tools_index.rst': No such file or directory
make: [Makefile:55: generate-api] Error 1 (ignored)
making output directory... done
myst v2.0.0: MdParserConfig(commonmark_only=False, gfm_only=False, enable_extensions={'deflist', 'amsmath', 'dollarmath', 'html_admonition', 'fieldlist', 'substitution', 'colon_fence', 'strikethrough', 'tasklist', 'attrs_inline', 'replacements', 'smartquotes', 'html_image', 'linkify'}, disable_syntax=[], all_links_external=False, url_schemes=('http', 'https', 'mailto', 'ftp'), ref_domains=None, fence_as_directive=set(), number_code_blocks=[], title_to_header=False, heading_anchors=0, heading_slug_func=None, html_meta={}, footnote_transition=True, words_per_minute=200, substitutions={}, linkify_fuzzy_links=True, dmath_allow_labels=True, dmath_allow_space=True, dmath_allow_digits=True, dmath_double_inline=False, update_mathjax=True, mathjax_classes='tex2jax_process|mathjax_process|math|output_area', enable_checkboxes=False, suppress_warnings=[], highlight_code_blocks=True)
building [mo]: targets for 0 po files that are out of date
writing output... 
building [html]: targets for 32 source files that are out of date
updating environment: [new config] 32 added, 0 changed, 0 removed
reading sources... [  3%] example
reading sources... [  6%] geospat
reading sources... [  9%] geospat-controls
reading sources... [ 12%] geospat-functions
reading sources... [ 15%] geospat-overview
reading sources... [ 18%] glossary
reading sources... [ 21%] index
reading sources... [ 25%] install
reading sources... [ 28%] intro
reading sources... [ 31%] overview
reading sources... [ 34%] preproc
reading sources... [ 37%] preproc-classes
reading sources... [ 40%] preproc-components
reading sources... [ 43%] preproc-cycle
reading sources... [ 46%] prereqs
reading sources... [ 50%] quickstartcomps
reading sources... [ 53%] troubleshoot
reading sources... [ 56%] vis_tools
reading sources... [ 59%] vis_tools.CSVReport
reading sources... [ 62%] vis_tools.CZMLWriter
reading sources... [ 65%] vis_tools.Color
reading sources... [ 68%] vis_tools.Config
reading sources... [ 71%] vis_tools.Demographics
reading sources... [ 75%] vis_tools.Gradient
reading sources... [ 78%] vis_tools.MigrationHelpers
reading sources... [ 81%] vis_tools.NamedColors
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reading sources... [ 90%] vis_tools.SpatialReports
reading sources... [ 93%] vis_tools.Survey
reading sources... [ 96%] vis_tools.VisSet
reading sources... [100%] vis_tools_index

looking for now-outdated files... none found
pickling environment... done
checking consistency... done
preparing documents... done
writing output... [  3%] example
writing output... [  6%] geospat
writing output... [  9%] geospat-controls
writing output... [ 12%] geospat-functions
writing output... [ 15%] geospat-overview
writing output... [ 18%] glossary
writing output... [ 21%] index
writing output... [ 25%] install
writing output... [ 28%] intro
writing output... [ 31%] overview
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writing output... [ 93%] vis_tools.Survey
writing output... [ 96%] vis_tools.VisSet
writing output... [100%] vis_tools_index

generating indices... genindex py-modindex done
highlighting module code... [  7%] vis_tools.CSVReport
highlighting module code... [ 15%] vis_tools.CZMLWriter
highlighting module code... [ 23%] vis_tools.Color
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highlighting module code... [ 84%] vis_tools.SpatialReports
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writing additional pages... search done
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copying static files... done
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dumping search index in English (code: en)... done
dumping object inventory... done
Updating searchtools for Read the Docs search... build succeeded.

The HTML pages are in ../_readthedocs/html.

[rtd-command-info] start-time: 2024-06-18T23:05:29.891714Z, end-time: 2024-06-18T23:05:33.220833Z, duration: 3, exit-code: 0
python -m sphinx -T -W --keep-going -b readthedocssinglehtmllocalmedia -d _build/doctrees -D language=en . $READTHEDOCS_OUTPUT/htmlzip
Running Sphinx v6.2.1
rm: cannot remove 'modules.rst': No such file or directory
make: [Makefile:55: generate-api] Error 1 (ignored)
making output directory... done
loading pickled environment... done
myst v2.0.0: MdParserConfig(commonmark_only=False, gfm_only=False, enable_extensions={'dollarmath', 'fieldlist', 'html_image', 'attrs_inline', 'html_admonition', 'amsmath', 'deflist', 'linkify', 'tasklist', 'colon_fence', 'substitution', 'strikethrough', 'smartquotes', 'replacements'}, disable_syntax=[], all_links_external=False, url_schemes=('http', 'https', 'mailto', 'ftp'), ref_domains=None, fence_as_directive=set(), number_code_blocks=[], title_to_header=False, heading_anchors=0, heading_slug_func=None, html_meta={}, footnote_transition=True, words_per_minute=200, substitutions={}, linkify_fuzzy_links=True, dmath_allow_labels=True, dmath_allow_space=True, dmath_allow_digits=True, dmath_double_inline=False, update_mathjax=True, mathjax_classes='tex2jax_process|mathjax_process|math|output_area', enable_checkboxes=False, suppress_warnings=[], highlight_code_blocks=True)
building [mo]: targets for 0 po files that are out of date
writing output... 
building [readthedocssinglehtmllocalmedia]: all documents
updating environment: 0 added, 1 changed, 0 removed
reading sources... [100%] vis_tools_index

looking for now-outdated files... none found
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preparing documents... done
assembling single document... overview prereqs intro quickstartcomps install example troubleshoot preproc preproc-cycle preproc-components preproc-classes vis_tools_index vis_tools vis_tools.CSVReport vis_tools.CZMLWriter vis_tools.Color vis_tools.Config vis_tools.Demographics vis_tools.Gradient vis_tools.MigrationHelpers vis_tools.NamedColors vis_tools.SpatialBinary vis_tools.SpatialBinaryHeader vis_tools.SpatialReports vis_tools.Survey vis_tools.VisSet geospat geospat-overview geospat-controls geospat-functions glossary done
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copying static files... done
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dumping object inventory... done
Updating searchtools for Read the Docs search... build succeeded.

The HTML page is in ../_readthedocs/htmlzip.